Microarray Probes on PGSC0003DMT400047169
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32659_PI426222305 |
JHI_St_60k_v1 |
GCTTTCTTTGATTGTTGATAAAACACACTTGGAATTAGAGTGCTTGAAGATTGAACCCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400047169
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400047169 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G03510.1 |
+1 |
1e-38 |
140 |
83/207 (40%) |
RING membrane-anchor 1 | chr4:1557905-1558654 REVERSE LENGTH=249 |
Transcript Sequence (1103 bp)
>PGSC0003DMT400047169 1103 pgsc_dm_v3.4
ATCATCCAATCTACTCTTTTATTTAAACCTCTGTTTTCACCTTTTTTTTTTTGCTTCTAA
AACACTAAGGATTCTTTGCTTTCTCCTTATAAAGACTCAATCTTTTGCTTGTGTATCAGT
TCAGAAACGTTCTTGATACAAATTTACTATTTGGACATTAGAAGCCAACTCTGTTACATC
AACAAGCAGGATATGGCCTTAGAACAGCTGGACACTACCTTTAACAAACACGATGCTCCA
TTAGGGAAATGGAAGACAATGAACGATGAAGTTGAAGAGAATATTTCCGGTGGTTTTGAG
TGTAACATATGCCTGGATCTTGTGCACGATCCTGTGGTAACTTTATGTGGTCACCTCTAC
TGTTGGGCTTGCATTTACAAATGGATTCATTTCCAGAGTGTTTCTTCAGAAAATTTGGAT
CAGCAGCAACCACAGTGCCCTGTATGCAAGGCTGAAGTTTCACAAAAAACCTTGATTCCA
CTCTATGGACGCGGTGGCCAATCTACAAAACCATCCGAAGGAAAGGCTCCGAATCTTGGC
ATAGTGATCCCACAAAGACCTCCTAGTCCAAGATGCGGCGGTCACTTGCTGATACCATCT
ACCGATTCAAATCCATCCCATCTCTTTCAACAACAGTCTCAAACACGTCAATCGCCTTAT
CAACAAAGCGCCTCACCAGGCACCACAGTTAATATGTTACAACCCTCCATGATTGGAGAA
GTGGCCTATGCAAGAATTTTTGGTAACTCATCAACAACTCTGTACACAAACTCTTACAAT
CTAGCAATCAGCAGTAGTCCAAGAATGAGAAGGCAATTATTAGAGGCTGATAAATCACTT
GGGAGAATATGTTTTTTCCTATTTTGTTGCTTTGTAACATGTCTAATCTTGTTTTGAACA
CTTTTGTCTGTTGCTTCTACTTTGTAAAAAAGAAGATATGGTGTTGTAGTAGATAAGAAA
ATGTACAGCCTCAGTTAAATGTGTAACAAATCATAGAAGCTTTTGCTTTCTTTGATTGTT
GATAAAACACACTTGGAATTAGAGTGCTTGAAGATTGAACCCTTTTTTGATATATTAATC
TAAGAAATGAGGTTGGAAATTCT
