Microarray Probes on PGSC0003DMT400046636
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_11762_PI426222305 |
JHI_St_60k_v1 |
CACAGTTCAAGTTCCATGGCCTAATTCTTCAAGATTGTCTGAAATTAAGTATGTTTTCTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046636
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046636 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G40390.1 |
+3 |
0.0 |
1036 |
502/804 (62%) |
Raffinose synthase family protein | chr5:16161720-16165085 FORWARD LENGTH=783 |
Transcript Sequence (2527 bp)
>PGSC0003DMT400046636 2527 pgsc_dm_v3.4
GCTTCATATCCTAAAAACTCCTTTAAATTCCTCTGTTTACTCTGTTTCTAATGGCTCCAA
GCTTGAACAAAAATGCCTCAGAAGTGATAGCCGGGCTAATAGATAACAACACAAAGCCTT
TATCCATCACGCTTAAAGGCTCTGAGTTTTTAGCCAATGGCTATCCTATACTTACTAATG
TTCCTGCCAACATCATTGCCACTCCATCACAATTCATTTCCAAAGATTTTACCTTCGTCG
GATTTGACTCCGACGAGGCCCGAAGCCATCACGTGGTCCCAATTGGCAAGCTCAGGGACA
TAAAGTTCATGAGCCTATTCAGATTTAAAGTATGGTGGACCACTCATTGGGTAGGCAAAA
ACGGCAGAGACATCCAGCATGAGACTCAAATGTTAATCTTAGACAAATCCGAAAACGGAC
TTCGTCCTTATGTTCTGATACTTCCGATTCTAGAAGGTTCCTTCAGAGCCTCGTTCCAGC
CTGGACATAACGATAATTTGGATGTCTGCGTGGAGAGTGGATCAAGTAAAGTTCGCGAAT
CCAGGTTCCGGACTTGCATTTATATGCACGTAGGGGAGGACCCCTACGAAATGGTGAAGA
ATGCTATGAAGATTATAAGATTACATTTAGGGACTTTCAAGTTGCTTGAAGAGAAGTCAC
TTCCAGGTATAGTAGATAAATTTGGTTGGTGTACTTGGGATGCTTTTTACCTTAAGGTAA
ATCCACAAGGGGTAATGGAAGGGGTTAAGGACCTAGTAGAGGGTGGTTGCCCTCCAGGAT
TAGTCTTAATTGATGATGGATGGCAATCGATTTGTCACGATGATGATCCGTTAACTGATG
ATCAAGAAGGAATCAACAGGACTGATGCTGGTGAACAGATGCCGTGTAGGTTAATAAAAT
TTGAAGAGAATTATAAATTTAGGGACTATGAGAGTCCCAGGGGAAAGGGGAAGGGGATGA
GGGCATTTGTAAAGGACCTAAAGGACGAATTTAAGTGCGTTGAGCATGTTTACGTGTGGC
ACGCGTTGTGTGGGTACTGGGGTGGGATTAGGCCTAATGTACCAAACATGCCGGATTGTA
GGGTCATTAGTCCTAAGCTGTCTCAGAGTTTGCAGATGACTATGGAGGATTTGGCTGTGG
ACAAGATTGTGAACAATGGTGTTGGATTGGTTCCACCGGAAAAGGTTCATGATATGTATG
AAGGATTGCATTCGCATCTTGAATCAGCTGGAATTGATGGAGTCAAGGTGGATGTAATTC
ATTTGCTGGAGATGTTATCAGAAGATTATGGAGGACGAGTGGAACTTGCCAAAGCATACT
ATAAAGCCTTAACTGATTCAATAAGGAAACATTTTAAAGGGAACGGTGTGATTGCTAGCA
TGGAACATTGCAATGACTTTATGTACCTTGGCACAGAGTCCATTTCTCTTGGACGCGTAG
GAGATGATTTTTGGTGCACCGATCCAACTGGGGATCCCAATGGGACATTCTGGCTGCAAG
GATGTCACATGGTACATTGTGCTTACAACAGTCTGTGGATGGGAAATTTCATCCACCCTG
ATTGGGACATGTTTCAATCTACTCACCCTTGTGCTGAGTTTCATGCCGCCTCTCGAGCCA
TCTCAGGAGGACCAGTATATGTTAGCGACTCAGTCGGCAAACACAACTTCCAGTTGCTGA
AGACATTGGCCTTGCCTGATGGTTCCATTCTCCGTTGCCAACATTATGCACTACCAACTA
AAGATTGCCTGTTTGAAGACCCTTTACATGATGGAAAAACCATGCTCAAGATTTGGAACC
TTAATAAAGTAAGCATTAATCTTATAACAAATGCAATTCACGTTTTTTTTAATAATTTGT
AGGATCAAAATTTCATCTTATTGTGTTATTCTGGCTGTAATGACTAATGACTATAGTTTA
CGGGAGTTCTTGGAGCATTTAACTGTCAAGGAGGAGGATGGTGCCCTGTTTCAAGGAAAA
ATAAAAGCGCGAACGAGTATTCAGTGGCAGTGACATGTTTGGCTAGTCCCAAAGATATTG
AATGGAGCAATGGAACAAATCCAGTAAGTGTGGAAGGAGTGAACATTTTCGCGGTGTACA
TGTATAGCCAGAAGAAACTAAAGCTCTTAAAATTGTCCGAAAATGTGGAGATTATTCTTC
AGCCTTTCAACTATGAGCTCTTAACAGTCACTCCTGTAGCTGTGTTGTCGAAAAAATCAG
TGCAGTTTGCCCCAATTGGATTGGTGAACATGCTCAATTCTGGTGGTGCAATCGACTCTC
TTGTCTACGACAACAACGATGAGGAGGAAGAAAGTTCAGTAAGCATTGGAGTGAGAGGGA
GTGGTGAAATGAGGGTGTTTGCTTCTGAGAAGCCGTCATCGTGTACGATCGATGGAGTCT
CTGTTGATTTTAGTTACGAAGATCATATGGTCACAGTTCAAGTTCCATGGCCTAATTCTT
CAAGATTGTCTGAAATTAAGTATGTTTTCTGAATCAACAAATCAGGAAAATTAAAATTAT
AGTCCAC
