Microarray Probes on PGSC0003DMT400046378
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_8774_PI426222305 |
JHI_St_60k_v1 |
GAAGAAGTTGGGTTGCTTTGAATTTGGAAAAAAGTTTCATGTTTGGTCTGCTTTGAGCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400046378
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400046378 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G57050.1 |
+1 |
2e-120 |
370 |
200/344 (58%) |
Protein phosphatase 2C family protein | chr5:23087720-23089303 FORWARD LENGTH=423 |
Transcript Sequence (2138 bp)
>PGSC0003DMT400046378 2138 pgsc_dm_v3.4
ATGATTAGTCTCTAATAACAAATCCTTGCATGCATCCTTTCTTGATTTGTTTGACTCTTG
AATTATATGGGGTTCTCACAAACCTTTTTTTTTTTTGATTCAACTAACTTTAGGTAATCA
AGAAGAAGTTGGGTTGCTTTGAATTTGGAAAAAAGTTTCATGTTTGGTCTGCTTTGAGCT
TGGATTTGAATAATTTTGGTTGGTTAGAAGATGGAAGAGATGTTTCCAGCACTTACTGTA
TCATATAAACAGGGAAAATTGATATATGATGAATCAGTATTACCCACATGTATTGACTTC
GCTGAATATGAGCTGATCCCGAATACGACTAGCTTGCTATCAGAACCTAACAAGTGCAAA
CTTCCTTGTTCGGTGTCGAATCATAGTGTGTCCAGGGACAAAGCTAACCTCTTTATGACA
GTTGCTGATTGCCATGAAATCAGGAAAGGGAAGAGTTTTTCTTCGACAGTTGTAGCTAAT
GGGAATTGTTTGATTGCTAGTGAGGTAAAAGATGGTAGATCTATGGACAACAATTTGATT
TCACCAACTGATGAGCTTTTAGGAAATATGACTTGTTCTGATTCTCTAGTGGATGAGTGT
GGCGGCATGCCTAACCAAGAATGTACAGATTTGGAGGTTAAAGTTGGGAGAACTCCTCCT
CGGAATGAAGACAAGAAGGTTGGTGTATCCCAGATTCTGAGGAAGTCTTTTTCGTGTAAT
TTGGCTAAAGAGTTGGTTAATGAGTCAGAACTTGTAAGTGATCTTGTTTCCACTATGGTT
GTGGGTGCTGAAGATTATAAAAGAAAATTATCACCATCCCATCTTGAGACCTCACAAGAG
ATAAAGATAAGTAGGCCAAATGCCTTTTGTTTTGATTCTGTACCGCTTTGGGGGATCATC
ACGATACAAGGAAAGAGGCCGGAGATGGAAGATACTGCTATAGCTTTACCAAGGTTTCTG
AGAATCCCTTCCCATATTTTGACGGATGCGCCAGTTTCTCATGCCCTGAGTCAAACACTT
ACAGCCCATTTATATGGGGTTTATGATGGACATGGAGGCTCTCAGGTTGCTAATTATTGT
CATGAGCGTCTCCATATGGTTTTAGCACAGGAGATAGATATTATGAAAGAGGATTCACAT
AATGGAAGTGTTAACTGGAAGGAGCAATGGTCAAAGGCTTTCTTGAATTGTTTCTGTAGA
GTCGATGATGAGGTAGGAGGGTTCTGTAGTGAAACAGACGGGATTGAGCCTGACCTTTCA
GTCATTGCTCCCGAAGCAGTTGGATCTACAGCTGTAGTTGCAGTTGTTAGTCCAACCCAT
ATTATTGTTGCTAATTGTGGTGATTCAAGGGCAGTCCTTTGTCGGGGAAAACTGCCCATG
CCATTATCCATTGACCATAAGCCAAATAGGGAAGATGAGTGTTCACGAATAGAAGAATTG
GGAGGGAAGGTCATTAATTGGGATGGACATCGCGTTTCTGGTGTTCTTGCAGTTTCAAGG
TCAATTGGTGATAGATATTTAAGGCCTTATGTGATTCCAGATCCAGAAATGATGTTTGTA
CCCCGAGCAAAAGAAGACGACTGTCTAATTTTAGCAAGTGATGGCCTATGGGATGTCTTG
ACAAATGAAGAAGCTTGTGATGTGGCCCGGAGACGAATTCTTCTCTGGCACAAAAAGAAT
GGTGGTACTTTGAGTAGCGAAAGGGGTGAAAATGTTGATCCTGCTGCTCAGGATGCTGCA
GAGTACTTGACACGAGTTGCTCTCCAAAGGGGGAGCAGAGATAATATATCTGTGATTGTG
GTCGACTTGAAAGCACAGAGGAAATTCAAGAAGAAAACGTAGCGCACTAAACCATCCTCG
TATTTCATTTTGTGGATGTAACATTGGAAACTTATCGTTCAGGATGATAATCAAATCAAA
TGGTACTCATGTTGCAGATTTTAGCTTCCTTTTTAATTAGGCTGTTACCGTACATGATGG
AAGTTATTCTGACAATAAAAATTCAGCAAAGTTGGTTCAAAGAACAAACTACTGACTCCC
AGCAGATTATTTATGTCACTATAGTATAATGTTGTCTCCCAGAACTCTCTCACTGTTTTC
TGTTACCATTTCTTGGCATGATATGTTTTGTTTTCCAC
