Microarray Probes on PGSC0003DMT400045971
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15531_PI426222305 |
JHI_St_60k_v1 |
GGGAACTCAAACTAATGAGGGATATGTTAGGTATGAAACTCATATTCTCAATAGTCTAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045971
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045971 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G56890.1 |
+1 |
0.0 |
794 |
442/670 (66%) |
Protein kinase superfamily protein | chr5:23010801-23015559 REVERSE LENGTH=1113 |
Transcript Sequence (4165 bp)
>PGSC0003DMT400045971 4165 pgsc_dm_v3.4
AGAGTGTTTGCGTTTTTAGTTAAAAGCTTTAATAGTTTAATTGCTCACTCACATGCTACC
TGAAACGCCTGTGTATAGCATGTTAATCTCACAAACACACCTTCTTATGCTCCCTCTTAC
ACTCCATTTTTGGGCGTGTCTGCCTCTTCATTGCTTCTTTCTCAATTTTCCTTTTTTTTC
TTTGTTATTGCTTCAACTTATCTAATTTTATCTCTCTTTTTTGGTACATATTTTCTACTT
TTATGTTGTGAGGTTTATGGGATGGGTGGAGTGAAGCTGCAACTTGTTTGTTTGGTGCTG
GAATTATGTGCCTTTGCTTTCTCTAAGGGATCTGCAGGCGTCAGTTTATCGCCCTCTCCG
TCAGCATCCTCTGCAGTTCCTCCTGTTGAAGAGGGAATACCCTCTTTTGTCTCTCATGGG
AATGCATCCACAAGTAATGCACCTGCTCCTGCATTTGAGTTAAATGTAACATCTCCTCCT
GCAAATGTCTTTCCACCACTGATGTCCCCCCCTGTCCCTCCACCGAGAGAAGTTCTTACA
CCGTCTCTGCAACCAAGTGCTCCCATAATATTGCCACCACCTAGTTCAGCTCCACCCGCA
ATCAATTCAGCCCCACCACAAATTGTTTCTCTACCATCTCCTCCTCCTCCAATAGTGTGG
AATGATCCCGCTCCAGTTCTGCCTCCGAGTGCTCCTAAGAGAGAGCATCGACATACTGAA
CAGCCTGTTGTTGTTCCAGAAGCTCCAGCACCAGTCTCGTCACCTGGAAGGAAATCTACT
GAAGATGCACCAACTAAAGCTCCACCGCTACCTGGAACTATGCCACCCAGTGAGAGCAAG
TCTCCAGAGGGTCCTCTCCCCTCAATTGCCCCGGTCCTGAATGCGCCTGCTCCAAGGGGA
AAGCCGCGAAATTCACTGCCCACCCTCCCAAGAAATCCAGAAATTTCACCATCCATTCCA
CCAGTCCTGAATGCACCTTCTCCAAGGGGAAAGCCACAAAATCCTCTGCCCACCCACCCA
ATCATTCCAGAAGTTTCACCATCTATTCCACCAGCGACAGTTGCACCACCTCCGAGGAGG
TTGCCTAACAATTCACCACCCAGCCATCCAAGACATCCTCTAAAACCTCCATCCGTTTCA
CCAGTTAAGCACGATATATCCCCTGTATCAACTCCGTGGCCAAGCATCAACCGTAAAAGA
GCAATTGGTCCAACTGTTGCACCTACTAAGGGAATGAACCATCAGCATCCAGCAAAAGGA
TTGTCAGTACCACCGATGCTTGCGCCTTTAACTTCTCCAGAAAGTCATGATTCTCCTGCA
ATATCACCGTCTCCAAGTGCTTCATCTAGACCAACAAAAAAGCCATTTCTTTCCCCTAAA
ATGTCTCCCTCTGGGTCTTCACCAAGGCATCCAAAGTTACCGCATCCATTTCAAGCACTA
CCACCTCCACCTCCTAATGAAGATTGCGCTTCATTGGCTTGTGCGGAGCCTTTCACAAAT
GGTCCACCCAAAGCACCTTGTGTTTGTGTCTTGCCCATGCGAATTGGACTACGCCTTAGT
GTAGCACTCTACACATTCTTCCCTTTGGTTTCAGAGTTAGCTACAGAAGTTTCTGTTGGG
GTATTTATGGATCCAAGTCAAGTTCGTATAATGGGAGCAAATTCAGCCAGCCAGTATCCA
GAAAAGACCATTGTCCTTATTGATTTGGTACCCCTTGGAGAAAAATTTGATAACACTACA
GCATTTGTGACATCACAAAGATTCTGGCACAAACAAGTTGTTATAAAATCACTTTTTGGT
GATTATGATGTATTATATGTGCAATATCCAGGTCTTCCTCCCTCTCCACCTTCAGCAGCT
TCAGACATTGATACCGTAGGTAGCCAACCATATCCTGGTGATAATAACGGAAGGACCATA
CAGCCCCTTGGAGTTGATGTGAAGGGGCAACAGCACAAAAGTGGGCCGAATCGGAGTGTC
ATAGCAGTAATTGTGTTGTCAGCCTCTGTCGCAGTTATTTTATGTTGTGCCGTTGCATGG
GTTTTGCTTTTCAGACATAGAGATCACGGATATCAGTTAGAACCAACTCCACCAACTACA
TTACCATCCCTTGCAAAGTCATCAGCCTCCATGATTGGGAGTAGGCCGAACTCTCCTACA
TTATCCTTTAGTTCAAGCTTTGCTGCTTATACTGGTTCAGCTAGAACATTTTCTTCAAAG
GAAATTGATAGAGCAACTGACAGCTTCAATGAAGCAAGAGTACTAGGTGAAGGGGGATTT
GGTCGTGTTTATAGTGGTGTGCTTGATGATGGGATGAAAGTGGCAGTGAAAGTCCTCAAG
AGAGATGACCAACAGGGTGGTCGTGAATTTTTGGCTGAAGTAGAGATGCTTAGCCGCCTC
CATCATAGGAACTTGGTCAAGTTGATAGGTATATGTCTTGAGGAGCGCAGTCGCTGTTTA
CTTTATGAGCTCATCCCAAATGGCAGCGTGGAATCTCACCTTCATGGTGTTGACAAGGAA
AGTTCTCCACTTGATTGGAATGCCCGAATGAAAATAGCACTTGGTGCTGCCCGAGGCCTG
GCCTATTTACATGAAGATTCCAGTCCCCGTGTCATACACAGGGATTTTAAGTCTAGTAAT
ATCTTACTGGAACATGATTTCACCCCGAAAGTGTCTGATTTTGGTTTGGCTAGAGCTGCA
TTAGATGAAGGAGAAAGACACATATCCACTCGAGTCATGGGAACTTTTGGGTACGTAGCT
CCAGAATATGCTATGACAGGGCATCTACTTGTGAAGAGTGATGTTTACAGCTATGGTGTT
GTCCTTCTTGAGCTGCTAACTGGAAAAAAGCCAGTGGATATGTCTCAGCCACCAGGTCAA
GAGAATTTAGTGGCTTGGGCACGGCCACTCCTAACGAGTGAAGAAGGTCTGGAGTTGATT
GTGGACCGTAATTTGGGGCCTGATTTCCCTTTCGATGACATTGTAAAAGTAGCTGCTATT
GCGTCAATGTGTGTTCAACCAGAGGTATCACACAGACCTTTCATGGGTGAGGTTGTCCAG
GCCTTAAAGCTGGTATGTAACGAATGTGGACAGACAAAAGACGTAGTGTCTCGAAGTTGT
AGCCAAGATAATCTGTCTATTGACATGGATACTAGGATTAGTACAACTTCAAGCCAAGTC
CTGAACCCTATACAACCTCAATCCCCAGTTTCTAACTCTGACAGTGAGCTGGATGTTGAG
AGGGGACTTTCAATGTCAGATTTACTGAGTCCGTTAGCAAGATACGGAAGGCAAGAATCT
GATTCATTTAGGAGGTATTCTAGCTCAGGTCCTCTGAGAAAAGGAAAAACCAGGAGGCTA
TGGCAGAAAATGAGAAGATTATCTGGAGGTAGTTTGAGCGAGCACGGCGTGATGTTTGGG
TTACGGCCTGGATCCCACTAATTGAAGTTTCCATCTTTGATTTTGATAAATGTTTCTGCA
AAATGTCTATTTTCGCCATCCATGCTGGATATACTAGATTGAGCATGGAATTGTACAGCA
CCTTCTTTATCAAGACATAGAATGAGGAAGCAAACACCAACATACTCAAATTGTCCTGAA
TGCTATCGCGTAATCCATGAGTATGATAAACCCTCCGCCAAAAGCTGGGAAGAACTGTGC
GCAACAAGATATCTGAATAGGGATTTCATCTTATGTAAGAAGATTGTATTTATTGTAACA
TGCTAATTGTTCATAAAAGGAATCATAGTTCTTTGTCTTCTGGTATTGAGTTTGAACCTT
GGAGGCAAACGAGTGATCTGCTGCTAAGATCTCATCCTTTGAACTTTCCTCTTTCACAAT
GCCATTTTCATTAAAAATCAGCATGGGTTTACTAGGCTTCACCCCATCCTTCAACTTATC
ATAACTCTTCTTATCACACACAACATTTTTGGGTTCATTACCCCACACCTTCAAGTACTT
TTCCACTTCTAGTAACAAATGGCAATCATTCTATGGATTAAGAAAAGTGTCTTCCTATCT
TTCATCCAATGATTCATTTGAGATGACAAGTGATTCATTTGTGCCTCAAGATGCTTGATT
AATGCTGAATGGGAACTCAAACTAATGAGGGATATGTTAGGTATGAAACTCATATTCTCA
ATAGTCTAAGTATGAAACTCAAAAA
