Microarray Probes on PGSC0003DMT400045908
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_35844_PI426222305 |
JHI_St_60k_v1 |
GAGGCTAGGGAGTGGACATATTATGAAGATGTGTAAGACGGTTGTAAAAGAATATATGAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045908
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045908 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G69260.1 |
+2 |
2e-66 |
225 |
157/388 (40%) |
ABI five binding protein | chr1:26039314-26040570 FORWARD LENGTH=345 |
Transcript Sequence (2098 bp)
>PGSC0003DMT400045908 2098 pgsc_dm_v3.4
TGAGTGAGTACATCTAAAAATAGACATAATTAAAACATCCATCTGTTGGAAAACTCTTTG
ATTAGAGACAGCACCAAAAAGGGGCTATTCACTCCTACCCACGTGTCACCTTCATCCTTA
CCAATTTCAGCCACTTGTCCTCTGCATACTACTTTCCTTGTCCCCTCCACACTCAAAAAT
CCATGCCCCATTTTCTTCACTCTTCCATTTTTCCATTTTCTGTTTCTTGTTTTCTTCATT
TTCTTGATTTTCCAGACACCCTTTTGCTGGAAACACAACATTCTCTTGTCATAGCTAACA
GTTTTCTTGATTTGTATGACATCTTTAGTTGATTTTTTTGCAATTCTTGATGAGGGGTTT
TTGAAATTTAGTGTAAAGACTTAATCTTGGAGCTAAAATGCAGTTAAAGATTAGATTTTT
CCATTTGGGTGTGGTTAAATTTGATCAAGAAATGTTTAAAAATGCAGAAACATGTGGAAA
GAGTTGAGTTTGATAGTTCTTTTTGGTGTATGGTGGTTTTACTATGGGTGATGCAGATGA
GAGGAAGAGGAGAAGTAGAGTGGAGATGGAGAATCTTTCATCGAATACAAGTAGATTTTC
AAGGGATTTGTTGCAAAGATTTATGGGAATTTCAGAAAAATCTGATCTTGAGAAAGTAGA
TGATATAAATGAAGATGAGTTGAATCTTGGGTTGTCATTAGGTGGTAGATTTGGTATTGA
CAAGAGTTCATCAAATTTATTGGTGAGGTCGTCTTCTATAGCTGCTTGTTTGCCAACAGT
TAGAGATGATGATGCAGTGGTATCATCATCATTATCACAATCAGTGAGTTATAATCCTAG
TTTAGTGAGAACTTCTTCATTGCCAGTGGAGACAGAGTTAGAATGGAGGAAAAGGAAGGA
GTTGCAGAGTTTAAGAAGGATGGAAGCTAAGAGGAGAAGATCAGAGAAAGTACAGAGGAA
TTTAAGGGGTGAGAAATGTATGGAAGATGAAAATAGAGGGACTGATCAGATGAATTTGAG
AGGTGGTAATAATAATAATAATAATAAATTGGAGAAAGAACAGTTCTTGGCTACTGCAAG
AAAGTTTGGTTGTAAGTTGCCAACATTGGCTGCTTTGGGGGCTGATGATATGGCAATGGC
AAAAGGGAAAGAAAGTTACTTTCAAGAAAAAAGAAAACCAGCATCACAAGGGTCAATGGA
ATCCCAAGGTGGTTGTTCTTCAAGTATATCTGAATTGGAAAGCAAACCTGCACAAGGGTC
AGCTGACGCAAGCCCTTCTAGTATCCAATCATTACAGAGTAGAGATTTCGGAAGCAGAAC
TCTAGGAGGAGAGGTGGAAATTAGTCCATCTAACACAACGAGAAGTCGAGTGCAAGAAAG
TGAGGCAAAAGCGTTGGGCGACATGCCGTGTGTTTTCACAAAAGGAGATGGTCCTAATGG
GAGGAGAATAGATGGTATATTATACAAGTATGGTAAGGGAGAAGAGATTAGAATTATGTG
TGTGTGTCATGGAAGTTTTCTTTCACCAGCTGAGTTTGTGAAGCATGCTGGAGGCAGCGA
CGTCGCGCACCCTCTCAAGCATATAGTTATAAAACCCAATCCTTCTCCCTTTCTATGAGC
ACAAAATGCAACATGCAATAATAAGGTCTAATCATGCTACTTCAGTCGTATGCTTGTGCA
AGTTGATCGGTTCGCCCTTTAGAAATAGGTTGTAATCCCTTTTCCCCTTTACTTGTTTCT
TTTAATCTTTCTCATCACGAGGACTAACTTATAAGTATCTATTTACTTGTGCACATTTTT
TTTTAATGAAATATGGAGCAATGGAACTTGAGCATTATCATAAAAGATTTCAGGTTCTAG
GTGTAAAATTGAAGTTTACTGAGGAGTACTTATTATTATTCTGGTGTCGGATAGGTGCAT
TTCGGATCTTTTTGCATGTTTTGGAGGATTTGATGCGAGTGAGATAATATATTGAAAAAG
TTCGAACAACATAGCTGAGAAATTACGATACAATATTGTATAGTAATATTGAGGCTAGGG
AGTGGACATATTATGAAGATGTGTAAGACGGTTGTAAAAGAATATATGACAATTCATC
