Microarray Probes on PGSC0003DMT400045838
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_50341_PI426222305 |
JHI_St_60k_v1 |
CGGACTCTGCAAAAATGTTGTCGTAGTATATGTAGGTGACATTTTTAAAGAGTTTGAAAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045838
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045838 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G34440.1 |
+1 |
1e-166 |
503 |
281/467 (60%) |
Protein kinase superfamily protein | chr4:16466008-16468748 FORWARD LENGTH=670 |
Transcript Sequence (2543 bp)
>PGSC0003DMT400045838 2543 pgsc_dm_v3.4
GAGAAAGGGACTTTCTCCCTAAGAAGGGAAAATCACATTGTTAGTCCCAATAAGATTTCT
CTCTCCCTTTGAGAACCCTTCATTTTCGGTATTCATTCAGGGGAATTGAGGAATTGTTGA
GACAAACAATTAAGTGATTTTCCGGCAGCAGTTGCGTGTAGATTTCACGCACAATCTTGG
CCGGAAGGTCAGCGTTTGGTTAACATGGAAGATTCTTCTCCTTCTCCTTCAAATTCTTCT
TCTTCTTCGCCCCCTCTTGACTCTTCTCCCCCTCCTTCTCCTCCTGAATCTTCTCCACCA
CCGCCAAAATCTGACTCTTCTTCACCTCCACCACCAAAATCTGACTCTTCTTCACCTTCA
CCTCCACCATCGAAATCTGACTCTCCTTCACCACCACCCCCTGAATCATCACCACCACCG
AAATCTGATTCATCTCCTCCTCCTCCATCCCCTAATCAATCACCCCCACCAAAATCCGAA
TCATCTCCTCCTCCTGCATCACCACCTCCTACAGAATCTTCTCCTCCTCCTCCATCATCT
ACAAATTTTTCTCCTCCATCGCCGAAATCATCTGATTCTTCTCCTTCTGATGACAATGAC
AACCCTAATACACAATCACCACCACCCTCCTTGAACTCTTCATCATCATCCCCACCACCA
ACCACGAACACCAAACCCTCTCCTTCCAAAAATACCTTCTTTAACGAACCTAATTCTCCT
CCATCATCTACATTCTCTCCACCCACTCCAGAATCATCTCTATTTCCATCTGAAAAGGCG
TTACCTACTTTTCCACCTTCACGAGATAATGCATCATCGAATAAATCACCTGGTAATTCC
TTAGGAAGCAATAACTCGCCACCACATGAACAATCATCTTCCTCAACTGTCGCAATAGTA
GCTGCAGTATCTGTGACAGGTCTATTAATTTTGGCCGTTGTCATTGTCTGCCTATTATGT
AATAGAAAGAAGAAGAAACAACCATACTATGTCGATCCTGCACATCCACCAAAAGGTGGT
GATCCTTACTACAATACGGGCAATTATTCTAGTCCTCATACGGATCACATTGTTACATTA
GCTCCACCACCAGGTGTAATGGGAACTCCTCAAGAAGGGGGTCGCGGGTGGACCCCGCCA
CCCCCTCCTCCAGCCGCGAATACGAGCAGTGAATTTAGCTCAGGTTATTCAAGCCATGTA
CCTGGAGGAGGGCCAGCTACAATACCATCTCCTAATTATGGTGGACTATCAAAAATTCAA
TTCACTTATGCTGACTTGGCAACCGCCACGGGTGGATTTTCGGAAGCAAATGTGTTGGGT
CAAGGAGGGTTCGGATTCGTGCATAAAGGTGTTTTGACAGATGGAAGTGTAGTCGCGGTT
AAGAGTTTGAAGTCCGGGAGCGGACAAGGAGAGAGAGAGTTTCAAGCTGAAGTAGAGATT
ATTAGTAGAGTTCATCATAGACATCTTGTTTCACTTGTGGGATATTGCATTGCTGATGGA
CAACGTATGTTGGTATATGAATTTGTTTCAAATGGAACTTTGGAGTATCACCTTCATGGT
AAAGGTCGACCTGTTATGGACTGGGGCCTTAGGCTTAAAATTGCTTTGGGATCAGCCAAG
GGATTGGCTTACCTCCATGAAGATTGTCATCCTCGAATTATCCATCGTGACATCAAGGGT
GCAAACATTTTACTTGATAACAATTATGAAGCCATGGTGGCTGATTTTGGATTAGCTAAA
CTTACCGAAGACAATAATACTCATGTCTCCACTCGTGTTATGGGAACTTTTGGGTACTTA
GCTCCAGAATATGCATCAAGTGGAAAATTATCAGAAAAGTCAGATGTATTTTCATTTGGA
GTTATGTTATTGGAACTTATAACTGGAAGAAGACCTTTGGATACTACCAATAAACTCATG
GATGACAGTCTAGTAGATTGGGCTAGACCTTTCCTTACGAAAGCACTAGAAGAGAATAAT
TACGATGAGTTGGTAGACCCGCGACTAGAAGGAAACTATGATCCCGATGAGCTACAAAGG
ATGGTAGCTTGTGCTGCTGCTAGCGTGCGCCATTCTGCTAGAAGACGTCCTAAAATGAGC
CAGATTTTACGTGCCTTGGATGGCGATTCATCTTTGGAGGACTTAAATGAAAAAGCTGGC
AAGAACAACACGGCTAATTTTGGCGGTGCAAGTGGGCCCGCCTCGGATCTCTACGACACA
TGTGCATACAATGCTGACATGGTGAAATTTAGGCAAATGGTGATGACAAGTCAAGATATG
AATAGTAGTGAATATGGTAACACAAGTGATTATGGACTCCATCCTTCTGACACTAGCAGT
GAATTCAGCAGTGATTATAATCATTCTGGAGCACACAAGCAAGCAAAATGATCAATTTGA
TTTAAGGTGGAAGAATCGGGGTGTTGTTCGGACTCTGCAAAAATGTTGTCGTAGTATATG
TAGGTGACATTTTTAAAGAGTTTGAAAGTAACATTGTTTTATTGAGAAAAAGGAGACTCA
AGTATGGAATGGTTAAGTTCCTA
