Microarray Probes on PGSC0003DMT400045690
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27405_PI426222305 |
JHI_St_60k_v1 |
AAGCTAGAAAATGACCCTTTCTGCTCAAGCTTTTTTCCCAACTGAATAAATGGAGTTGTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045690
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045690 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G62230.1 |
+3 |
6e-99 |
210 |
128/349 (37%) |
ERECTA-like 1 | chr5:24996433-25002130 FORWARD LENGTH=966 |
Transcript Sequence (2387 bp)
>PGSC0003DMT400045690 2387 pgsc_dm_v3.4
TGGAACTACAAGAAAACCAACTTAGTGGTCCAATTCCTGCTTCCTTTGGCAATTTGAGAA
ACTTGCAATTTTTGTATCTCCACACCAACAAACTTTCTGGTTCTATTCCAAAAGAACTTG
CATTTTTGGATAACTTGGTTGAGCTGATAATAAATGAAAATCAGCTTTCAGGCCATTTGC
CTGAGCATGTTTGCCAAGGTGGGAAACTTGAGAACTTCACGGTGAATAATAACAAGCTCA
CAGGGCCAATACCAAGCAGCTTAAGCAAGTGCTCGAGTTTCAAAAGGCTGCGCTTCAATA
ATAACAGTTTTACTGGGAATTTATCTGAAGCTTTTGGCATCCATCCACACCTTCATTTCA
TTGATTTGAGCGACAATGATTTTTATGGTGAACTCAGCAGCAACTGGGGGAAATGCGAAA
ATTTGATTGATCTGCGTGTAGCCAGAAATAACATTAGTGGTAGCATACCACCAGAGATTG
GAAATGTCAAAGGGCTTTTAGGACTTGATCTTTCATCAAATCATTTGATTGGACAGATTC
CAAAGGAATTTGGAAAATTAACCTCTCTAGTTAATCTTTTTTTACAAACCAACCAAATTT
CTGGCAATATACCTGAGGAACTTGGGTCACTGACAAAGTTAGAGTCCCTCGATCTATCAG
ACAACAGATTGAATGGGTCAATACCGATGTGTATAGTAGATTTCGTGCACTTGTTTCAGT
TGAACCTGAGCAACAACAAGTTTGGCCAGAAAATTCCTAAGGAGATAGGGAGGATAACTC
AGCTCAATGTACTTGATTTAAGCTATAATCTTCTGGTTGGAGATATACCCCCTCAGTTAG
ACAATTTGAAGGTGTTGGTAAACTTAAATCTTTCCCACAATGGCCTATCTGGGCGCATTC
CCAGAGAACTTGATACTTTGACTGGTTTGCAGGATGTCATATTGTCATACAATGAGTTGG
AAGGTCCAATCCCTAATAATAAGGCTTTTATCAATGCCTCATTGGAGGGTAATAAAGGTC
TTTGCGGCAATGTAGCAGGACTCCATCCCTGCGAAATGTCGTCTTCTGTGGTGAAGAGGC
ACTCAAGGCGAAGGGACGTAAACTCATCCTCTTCACTGTACTTCCTGTTATGGGAGCACT
AGTACTGCTCTGTGTTTTCATTGGTGTTCTCTTTATGTGTAATAAAAGAAGGAAAGTTAG
AGACGTTGAAAGAAGGGATGATGATGGTTGGCTTTCAATATCCATGTTAGATGGGAAGGC
ATTGTACAGGGACATCTTAAATGCCACAGAAGAGTTTGATGCAAAATTTTGCATCGGGCA
AGGAGGACACGGAAGCGTTTACAAAGTAAGCCTTCTATCATTAGGGAATATAGCTGTGAA
GAGACTTCATTCTTCATTTCAGAATACACATCCCAAAAGCTTCATGAATGAAGTAAGGGC
ATTGACTGGGATTAAACACCGGAACATTGTGAACCTCTACGGCTATTGTTCGAAAGCACA
ACACTTGCTCTTGGTTTATGAGTATGTGGAGAGGGGGAGTTTGTCTAGTATTTTGAGCAA
TGAAGTTGAGTCCAAGAAATTGGATTGGCTTAAAAGGGTGAATATCATCAAGGGTGTTGC
TTTTGCTTTATCTTACATGCACCAAGATTGTTCACCACCCATTGTTCATCGAGACATAAG
TAGCAGTAATGTTTTGCTTGATTCTGAGTATGAAGCTCGTGTTGCAGACTTTGGACTAGC
GAAGATTCTCAATCCAGACTCATCCAATTGCACTACACTTGCAGGCACATATGGCTATGT
CGCACCTGCTTGCATATACTATGAAGGTTACGCAAATGTGTGATGTGTATAGCTTTGGAG
TATTATCATTGGAGATAGTCAAAGGAAAGCATCTTGGGGAATACATTACTGTGCTAGCAA
ATTCATCGACTATAGATCCTGAGCAGCTTAGCGATTTGCTGGATGAACGCCTTCCATATC
CTGAAGATAGAGTAAAAGATGTTTTGGTTTTTATCATCAATCTAGCATGCTCTTGTTTGC
TTAAAACTCCAAAATCAAGGCCAACAATGCACTTCATCTCTCAGAAGTTATCCTCAATGG
ATGCACGTCCACCTATTCATCAGAGAAACCCCCATGTAAGGCGAGCAATATATAATCCTT
GATATGTATGGAAATGTCGGTAGTGTGAAGTAAGTATTTCAATTGCTGGGACTAGTATTT
TTAGGGTTCTCATTTTGTTTACTGTATTTAAGACCTTATATTACAGTCGCACATAGTTCG
TCTTGGAAGTTTTCATTCGATTTCAAAGATTTTACCTGTATGTATAGAAGCTAGAAAATG
ACCCTTTCTGCTCAAGCTTTTTTCCCAACTGAATAAATGGAGTTGTT
