Microarray Probes on PGSC0003DMT400045523
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32547_PI426222305 |
JHI_St_60k_v1 |
GTAAACCTCCTTTCGTGTCTTAACTTGCCTTTCCAGTTTTCAATGATATTGTTGTAATGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045523
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045523 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G07090.1 |
+2 |
3e-120 |
357 |
176/269 (65%) |
PPPDE putative thiol peptidase family protein | chr3:2243153-2244476 REVERSE LENGTH=265 |
Transcript Sequence (1462 bp)
>PGSC0003DMT400045523 1462 pgsc_dm_v3.4
TGACTAAGTAATATAAGAATTCCCAAATTTTCTGGAATTTGTATTCTCTTTATCCACGCC
AAACAAATAACATAATTTTCCTTTTATCTCTGCACGATTCTTTCGATTTGCCTAATTCTC
AGGTCATCTTTCCAGCTCCACTTGGTTGTGTAGTGCATTTGTTTCCAAGAAAGCTTTTTT
ATTGGAGATGGCTGAGGACGGTCACAAGGTTATCTTGAATGTCTATGACCTGAGCCAAGG
TTTAGCTCGACAATTGTCTACTACTTTTTTGGGAAAAGCTATTGAAGGAATATGGCACAC
AGGAGTAGTGGTTTATGGTCATGAATATTATTTTGGAGGTGGTATACAACATGCTCCAGC
TGGGACGACACCATATGGAACTCCTGTTCAAGTTGTAGACCTGGGTGTCACCCACATACC
AAAGGATGTCTTTGAAATGTATTTACAAGAGATAAGCCCTCGATATACTGCAGAGACATA
CAGTTTGCTTACCCACAACTGCAACAATTTCAGCAATGAGATTGCTCAATTTTTGGTTGG
TGCAACCATTCCAGATTATATTTTGAATCTTCCTAATGAGGTTACGAACAGCCCGATGGG
TGCCCTTATAATGCCCATGATACAACAACTGGAATCAACGTTGAGGGCTAATGCGGTACC
ACAAGCACCCCAGTTCAGACCAGCTACTATTGCTCCTGCTTCCCAGCCGACACTTTCTGT
TGGGAAGTCCTCTAGTAGTGGTGTTTATCAATCTAATAAGCCCGAGAGCCAAGATGGAGA
GAAGAAGAATGTGCCCCCTGCAGTCAAACCTGTGGGAGAGCAGGAGAAGACGCCTGCTAA
TGGTGTTGTGAAAGATCCTCTTGGGGATGCTCGGAGCAAGGTACAAGAGGAAATCACCCG
TGAATTTGCTGCAATCATGGCTACTGGGACATTGCGTGCAAGTGAGGCTGCTGCTTTAGC
AACTAAAAAAGTTATGCAAAGATATGGAGATACATTTGCTGCTATGAACTAATGACAACG
AAGTTGTCTTTATAAATTCATCTGTGTTGGAAATTTAATATCCAACTGATTTGATGTAAG
GTAGACTTATTGGATGCTTAATAGGAGATGAGCAAACATTCTTCCTTGAAAGAGATACGC
ATATTGTTCTCTTTCTGGACTTCATACATTGAATAAGAACTACTTTTTACAACTACGACT
TGAGTTTATGAATCCTTTTCCTTGAAAGAGATACGCATACTCTACTCTTTCTCGAAATTG
AAAATTGAAGCTTATCCTGGATAAACACTTGTTTGGTGTAGTTTTGCTTCGGTTTGGGGG
TTAAGTTGGCGTTTCTACCTCAAAATGTAAACCTCCTTTCGTGTCTTAACTTGCCTTTCC
AGTTTTCAATGATATTGTTGTAATGTTTACAAAAAGATATCTGAACCATGTTGCCAAAGT
ATATGATGATGACATGACAAGA
