Microarray Probes on PGSC0003DMT400045509
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32519_PI426222305 |
JHI_St_60k_v1 |
CTGTCCTCAGATCTTGTATATGAGCTTTAGAGATATGCTTTAGCAAGTCAGATTTTTCAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045509
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045509 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G48800.1 |
+1 |
0.0 |
747 |
421/571 (74%) |
Phototropic-responsive NPH3 family protein | chr5:19786881-19789003 FORWARD LENGTH=614 |
Transcript Sequence (1940 bp)
>PGSC0003DMT400045509 1940 pgsc_dm_v3.4
AAACATGTGATGCAGTTTCCTCTTGTATCGAGGAGTGGGAGAATTCGGAAGCTTGTAGCA
GGGCACAGGGATTCTGATATATCGATGATTGAACTACTTAGTCTACCAGGTGGAGCTGAA
TCATTTGAGCTAGCAGCCAAATTTTGTTATGGAGTTAACTTTGAGATTACAGCTGCAAAT
GTTGCTCAGCTTTGTTGTGTGTCTGATTATCTTGAGATGACTGATGAGTATTCGAAAAAT
AACCTTGGTTCCCGAGCTGAAGAGTATCTCGAGGTTGTTGTAAGCAAGAATCTTGAAATG
TGTGTTGAAGTTCTTAAACAATGTGAAAACCTGCTCCCTTTGGCTGATGAGCTGAAAGTA
GTTATCCGATGCATTGATGCTATAGCCTCTAAAGCTTGTGTGGAGCAGATTGCTTCAAGC
TTCTCGCGCTTGGAATATAGTAGTTCTGGTAGACTCCATATGAATCGCCAGGCTAAGTGT
GAAGGAGACTGGTGGATAGAGGATTTATCAGTTCTTCGTATTGACTTGTATCAACGAGTC
ATAACAGCAATGAAATGTCGTGGTGTTAGGCCTGAAAGTATTGCAGCTTCACTAGTTAAC
TATGCTCAGAAGGAGTTGACAAAGAAGTCCACTTCCTGGAATCAGTCGACCCAACCAAAA
GTTGATGTGGTTTCAGGTTCAAATGACCATGAAAAAGTTGTGGTCGAGACGATTGTTAGC
CTTATGCCTGTTGAGAAATTGGTTGTTCCCATAACCTTTCTTTTTGGGCTACTGAGAAGT
GCTGTGATGCTTGATTGCACAGTTGCTTGTAGACTTGATCTTGAGAGGCGGATAGGATCT
CAATTAGACATAGCTACTCTCAATGATCTTCTCATTCCTTCTTTTCATAATGCTGGTGAA
ACATTATTTGATGTCGACACAGTGCATAGGATCTTGGTTAGTTTTTCTCAACAGGAGGAT
AGTGATGAAGATATGGATGATGTCTCAGTGTTTGAGTCTGATAGCCCTACTTCGCCATCC
CAAACTGCATTATTCAAAGTCGCAAAACTGGTGGACAATTACCTAGCTGAAATTGCACCT
GATGCAAACCTAAAGCTGAACAAGTTCATAGCAATTGCTGAAAGCTTACCAGCACATGCT
CGTACCATCCATGATGGACTTTATCGAGCAATCGATGTCTACCTCAAAGCTCATCAGGCC
TTATCAGATCCAGACAGGAGGAGACTATGCAAGCTGATTGATTTTCAGAAACTCTCACAA
GAATCTGGAGCACACGCTGCACAAAATGAACGCCTCCCACTCCAATCAATTGTACAGGTT
CTTTACTTTGAGCAAATGAGGCTTCGAAATGCCTTATTTTGTTCTTATCCTGATGATGAT
CATAAACCAATGCACCAATCGTGGAGGATCAATAGTGGTGCTGTAAGTGCAGCTATGTCT
CCCAGGGATAATTATGCTTCTCTAAGACGAGAAAATAAGGAACTAAAACTTGAACTAGCA
CGAATGAGGATGAGATTGAATGACCTGGAGAAAGATCATGTTTGTATGAAGAAAAATATG
GAAAAATCTAACTCGCGGAGATTCATGAGTACATTCACGAAAAAGATTGGGAAGTTGAAC
ATCTTTGGACATAGTTCTTCCAGGGAGTCTAGTTCCCCCTCAAAGAGGTCACAAGTTACT
GATTCTAAGCTAACTGAAAGAACATGACAGACAAACTTCCTGTTACTTAAAGTTACTTGG
ATAGGTTTTGGTTGCTCCTAGTGCAAATAGTACTTGTAATCTCTGTTCTCTATTTTTCTG
TCCTCAGATCTTGTATATGAGCTTTAGAGATATGCTTTAGCAAGTCAGATTTTTCATTTT
TCATTCAAGTAACGTAAATTTTGAGTTTCTGATCTCCAGAAGGATGTTTAAGTTATACAC
ATTGATATATCTCATCTACA
