Microarray Probes on PGSC0003DMT400045204
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24904_PI426222305 |
JHI_St_60k_v1 |
GTATTCTTTGTTCAGGACATAAATGAAGAAGAAATTTGATGGCGGGTGAACTTGATTTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045204
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045204 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G32640.1 |
+2 |
1e-166 |
501 |
337/610 (55%) |
Basic helix-loop-helix (bHLH) DNA-binding family protein | chr1:11799042-11800913 REVERSE LENGTH=623 |
Transcript Sequence (2560 bp)
>PGSC0003DMT400045204 2560 pgsc_dm_v3.4
TTCTACTCTTAACTCAAAAAAACAAATCTTTTCTATTCTCTCTCATATCTCTCCGCCACC
CCCTGTTTTCTCTCTCTCTCCACCATTTTCACCTGTTTCTTGCTGTGTTTATGGAATGAC
TGAATACAGCTTACCCACCATGAATTTGTGGAACAATAGTACTAGCGATGATAACGTGTC
TATGATGGAAGCTTTTATGTCTTCTGATCTTTCTTTTTGGGCTACTACTAATTCTACTAC
TACTAATTCTGCTTCTGCTGCTGTGGTTGGCGTCAATTCAAATCTTCTTCATACTAATAA
TAATAATAATAATAATAATAATTCTCCGTCTGTTTTTCCTCTATCTTCTTCTACATCTGT
ATCCGCGGCTGCGGCTGTGGATGCTTCCAAATCTATGCCGTTTTTCAATCAAGAAACCCT
TCAGCAGCGTCTTCAAGCTCTTATCGATGGTGCTAGAGAGACGTGGACTTACGCTATCTT
TTGGCAGTCGTCGGTTGTTGATTTCTCGAGTCCTTCTGTGTTGGGTTGGGGAGATGGTTA
TTACAAAGGCGAAGAAGATAAAGCCAAAAGGAAATTAGCGGTTTCTTCTCCTGCTTATAT
TGCTGAGCAGGAGCACCGGAAGAAGGTTCTCCGGGAGCTGAATTCGTTGATTTCCGGGGC
ACCAGCTGGGACCGATGATGCTGTTGATGAAGAAGTTACCGACACCGAATGGTTCTTTCT
TATCTCCATGACCCAATCGTTTGTTAATGGAAGTGGGCTTCCTGGTCAGGCGTTGTATAG
TTCCAGCCCTATTTGGGTCGCCGGAACTGAGAAATTGGCAGCTTCCCACTGCGAACGGGT
TAGACAAGCACAAGGGTTCGGGCTTCAGACTATTGTCTGTATTCCTTCAGCTAACGGCGT
GGTTGAATTGGGCTCGACGGAGTTGATTGTTCAAAGTTCTGATCTCATGAACAAGGTTAG
AGTATTATTTAACTTCAGTAATGATTTTGGGTCTGGTTCATGGGCTGTGCAGCCGGAGAA
CGACCCGTCGGCGCTTTGGCTCACTGAACCATCGTCCTCAGGTATGGAAGTTAGAGAGTC
TTTAAATACAGTTCAAACAAATTCAGTTCCATCAAGTAATAGTAATAAGCAAATTGCTTA
TGGAAATGAGAATAATCATCAATCTGGAAATGGTCAGAGTTGTTACAATCAGCAGCAACA
ACAGAACAATCCCCCTCAACAACAAACACAAGGATTTTTCACGAGGGAGTTGAATTTTTC
GGAATTCGGGTTCGATGGAAATAGTAATAAGAATGAGAATGCATCGCTCTCTTGCAAACC
TGAATCAGGAGAAATCTTGAATTTTGGTGATAGTACTAAAAAAAGTGCTTCCAGTGCAAA
TGTGAACTTGTTTACGGGTCAGTCCCAATTTGGGGCAGTGGAGGAGAATAACAATAACAA
GAACAAGAAAAGATCAGCTACTTCCAGGGGAAGCAATGAAGAAGGAATGCTTTCATTTGT
TTCAGGTACAGTTTTGCCTTCTTCGGGTATGAAGTCAGGTGGAGGCAGAGGCGAAGACTC
TGAACATTCAGATCTTGAGGCTTCAGTGGTGAAAGAAGCTGATAGTAGTAGAGTGGTAGA
ACCAGAAAAGAGGCCAAGGAAGCGAGGGAGAAAGCCAGCGAATGGACGAGAGGAGCCTTT
GAATCACGTCGAGGCAGAGAGGCAAAGGAGGGAGAAATTGAACCAAAGATTCTACGCGCT
TAGAGCTGTTGTACCAAATGTGTCTAAGATGGACAAGGCATCACTTCTTGGAGATGCAAT
TTCATATATAAACGAGTTGAAATCAAAGCTTCAAAATACAGAGTCAGATAAAGAAGACTT
GAAGAGCCAAATAGAAGATTTAAAGAAAGAATCAAGGCGCCCCGGTCCTCCACCACCAAA
CCAAGATCTCAAGATGTCTAGCCACACCGGAGGCAAGATTGTAGACGTGGATATAGACGT
TAAGATAATCGGATGGGATGCAATGATTCGTATACAATGTAATAAAAAGAATCATCCAGC
TGCAAGGTTAATGGCAGCCCTCATGGAATTAGACCTAGACGTGCACCATGCCAGTGTTTC
AGTTGTCAACGATTTGATGATCCAACAAGCCACAGTGAAAATGGGTAGCAGACATTACAC
TGAAGAGCAGCTTAGGGTAGCATTGACATCGAAAATTGCTGAAACCCCCTTAGAAAGTAG
ATAGAAATCGTCGAGGGCTTTGAATTAATTAACCTTGTGAATTGTGTTCCAAGGCAATGC
TTAAATTAAAGGATATGGTTTCTGCTAAAGCTCTAAGTAATGTTTTTGTACTGAAGTTTG
AGAGATTAAGACGAAGACTATCTTCGTGTTATTTTTCCAACTTGTACATAGATGTTAATC
CCGATTAACTCAACTTAATCGGGCTTTAGTTCATGTAATTAAAGATAAATTTGCAGCTAC
GTACGCCTCCGCGTCTGTAAGATTGCATCCATCCTTGTGTATTCTTTGTTCAGGACATAA
ATGAAGAAGAAATTTGATGGCGGGTGAACTTGATTTTGAA
