Microarray Probes on PGSC0003DMT400045176
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24831_PI426222305 |
JHI_St_60k_v1 |
GCAGCAACAGTAATAGCACACCAACATACTTGGAGATATTTTTCTCATACAAACACTTAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045176
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045176 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G25960.1 |
+2 |
0.0 |
1840 |
945/1215 (78%) |
P-glycoprotein 2 | chr4:13177438-13183425 FORWARD LENGTH=1273 |
Transcript Sequence (3928 bp)
>PGSC0003DMT400045176 3928 pgsc_dm_v3.4
AAAAAAAATGAGCCAACAAGAAAGTCATGCATTATCTGTTGACAGTAGCAACATTTCAAA
AATGAAGCAGAAAAATAATAATAATGGAGAAGAAGAAAGGAAAAAGATTCATCAGAAAGT
TTCATTGTTGAAACTTTTCTCTTTTGCTGATTCCTATGATTATTTGTTGATGATTTTGGG
ATCTATTGGTGCTTGTTTACATGGTGCTTCTGTACCTGTTTTCTTCATTTTCTTTGGCAA
AATGATTAATATTGCTGGCCTTGCTTACCTTTTTCCTGCTCAAACTTCTCACAAAGTTGC
CAAGTATTCATTGGATTTTGTGTACCTAAGCGTGGTGATATTATTTTCATCATGGATAGA
GGTGGCATGTTGGATGCACAGTGGAGAAAGACAAGCAGCAAAGATAAGAATGGCATACTT
AAAGTCTATGTTGAATCAAGATATAAGTCTCTTTGACACTGAGGCTTCTACTGGAGAAGT
CATTTCTGCAATTACCAGTGATATTATTATTGTTCAGGATGCTATTTCTGAAAAGGCAGG
GAATTTCTTGCATTATATCAGCCGTTTCTTAGCTGGTTTTACAATTGGGTTCATAAGAGT
ATGGCAGATCAGTTTGGTGACGCTTTCAATTGTGCCTTTGATCGCTCTTGCTGGTGGTAT
TTATGCCTATGTTACCATTGGTCTCATTGCTCGAGTCCGCAAATCCTATATTAAAGCTGG
AGAGATTGCTGAAGAGGTTGTAGCTAATATTAGAACAGTGCAAGCATTTACTGGAGAAGA
GAAGGCGGTAAAATCGTATAAAGGTGCCTTGTTGAACACTTATAAGTATGGGAGAAAAGC
TGGATTGGCCAAGGGCTTGGGTTTGGGCACCTTGCATTGTGTCCTTTTCCTTTCTTGGTC
ATTGCTTGTGTGGTTTACTAGCATTGTTGTGCACAAGAACATTGCAAATGGAGGAGATTC
TTTCACCACCATGCTCAATGTTGTCATTGCTGGCCTGTCACTGGGGCAGGCAGCACCAGA
TATTACAGCATTCCTCAGGGCTAAGTCAGCTGCCTATCCTATTTTTGAGATGATTGAACG
AGATACTATCAGTAAAACCAGCTCCAAGAGTGGTCAGAAGCTGAGCAAAGTAGATGGACA
CATACAATTTAAGGATGTATGTTTTAGCTATCCATCTCGTCCCGATGTGGTGATCTTTGA
CAAGCTCTCTCTTGATATTCCATCAGGGAAGATTGTAGCTCTTGTGGGAGGAAGTGGATC
AGGGAAAAGTACAGTTATATCTTTGATTGAACGCTTCTATGAACCGCTCTCGGGACAGAT
ATTATTGGATGGATGTGATATTAGGCACCTGGACTTGAACTGGCTGAGGCAGCAAATAGG
GCTAGTAAATCAAGAACCCGCTCTTTTTGCTACAACCATTAGAGAGAACATTCTCTATGG
AAAAAGTGATGCTAGCCTAGAAGATATTGCACGTGCGGCCAAACTTTCCGAGGCAATGAC
TTTCATCAACAACCTCCCCGATCGGTTTGAAACTCAGGTTGGTGAAAGAGGGGTTCAGTT
ATCTGGGGGGCAGAAGCAAAGAATTGCAATTTCTCGTGCTATAGTGAAGAATCCATCAAT
TCTTCTATTAGATGAAGCTACAAGTGCACTTGATGCTGAGTCAGAAAAAAGTGTACAAGA
TGCTCTTGATCGTGTGATGGTGGGAAGAACAACTGTAATTGTTGCTCATCGCCTTTCTAC
CATTAGGAATGCTGATATCATAGCGGTTGTAAACAATGGCAAGATAGTAGAAACTGGAAG
TCACGAGGAGCTTATTTCAAAACCAAATAGTGCCTATGCATCACTTGTTCAACTTCAACA
TGCAGCTTCTTCACATCTCCATCCTTCTCAAGAGCCAACCATGGGACGACCTCATAGCAT
AAGGTATTCCCATGAATTATCCCGAACGACAACTCGAAGCCGTGGAGCTAGCTTTCGTTC
TGAAAAATCTGTTAGCGGTATTGGTGCTGGTGGTGTAGAGGATGTTAAGTCACAAAATAT
TTCCGCAGGGAGATTGTATTCTATGATTAGTCCTGAATGGCATTATGGAGTTATTGGAAC
TGTCTGTGCATTTATTGCTGGAGCTCAGATGCCTCTCTTTGCCTTAGGGGTGTCACAGGC
CCTTGTGTCTTACTACATGGATTGGGATACAACACGCCACGAAGTGAAGAAGATTTGTTT
CCTGTTTTGTGTTGGTGCAGTATTAACCGTCGTCGTTCATGCCATTGCACATACTTGCTT
TGGAATCATAGGAGAGCGGCTTACTCTTCGCATGAGAGAAAGGATGTTCTCTGCTATGCT
AAGAAATGAGATAGGATGGTTTGATGAGATGAACAACTCAAGTTCTACACTTGCATCACG
ATTGGAAAGTGATGCTACTCTATTGCGAACTGTAGTGGTTGATCGCTCTACTATTCTCCT
ACAGAATGTGGGTTTGGTGGCCACTTCCTTCATCATTGCATTCATCTTGAATTGGAGGCT
CACCCTTGTTGTCATAGCTATGTACCCACTTATCGTTAGTGGTCACATCAGCGAGAAACT
CTTTATGTCAGGCTTTGGTGGTGACTTGAGCAAAGCCTATCTTAGAGCAAACATGTTTGC
TGGTGAGGCTGTAAGTAACATCAGAACTGTTGCAGCATTCTGTGCTGAGGAGAAGGTAAC
TGATCTCTATGCTCGTGAACTTGTTGAACCTGCAAAGCGTTCATTTAGCAGGGGACAGAC
TGCCGGGATCCTTTATGGAGTCTCTCAGTTTTTCATCTTCTCCTCTTATGCCCTTGCCTT
ATGGTATGGTTCTGTTTTGATGGGGAAGGAGCTAACCAGCTTCAAAGCTGTTATGAAATC
GTTTATGGTTTTGATTGTAACTGCTTTGGCTATGGGAGAGACTCTTGCTATGGCACCAGA
CCTTATAAAAGGAAACCAGATGGTAGCATCAGTATTTGAAGTGCTTGATCGGAAGACAGA
AATTGCAACCGACAGTGGGGAGGAGGTAACTGCGGTTGAGGGAACAATTGAGTTTAAGGA
TGTTGAGTTCTGCTATCCTGCAAGACCCGATGTTCACATTTTCAGAGATTTCAATATGAG
AGTGCATGCGGGAAAGAGTATGGCGATAGTAGGGCAGAGTGGTTCTGGTAAAAGCTCAGT
ATTGGCTCTCATCTTACGGTTCTATGATCCAATATCTGGGAAAGTGATCATTGATGGCAA
GGACATCAGGAAACTAAAGCTCAATTCTCTAAGAAAGCACATTGGCCTGGTCCAACAAGA
ACCAGCACTCTTTGCCACAACAATCTATGAAAACATCCTTTATGGAAAAGAGGGAGCATC
TGAAGCAGAAGTGATTCAAGCAGCTAAGCTTGCTAATGCACATAGTTTCATTAGTGCTCT
TCCTGATGGCTACTCGACCCAAGTTGGGGAACGAGGAGTTCAATTGTCCGGTGGACAGAA
GCAAAGGGTAGCCATTGCCCGAGCTGTTCTCAAGAACCCTGAAATCTTGCTATTAGATGA
AGCTACAAGTGCTCTGGACGTGGAATCTGAGCGTATAGTTCAACAGGCGTTGGACAGGTT
GATGCGAAACAGGACTACTGTCATCGTGGCACATCGACTATCCACCATAAAAGATGCAGA
TCAGATATCTGTTTTACAAGATGGGAAAATCGTCGATCAAGGGACTCACTCTGCATTGAT
AGAGAACAGAGATGGAGCATACTATAAGCTAATTAACTTACAGCAACAGCAGCAACAGTA
ATAGCACACCAACATACTTGGAGATATTTTTCTCATACAAACACTTAAAATGTGTAAAAT
TCTTTTCCCCTATACTTAATATAATTGCAATAATATACTTTGTATTTAGAGTTGTATAGG
CTATTTTTAACTGTTCTTTCTTCCCCTG
