Microarray Probes on PGSC0003DMT400045174
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_24926_PI426222305 |
JHI_St_60k_v1 |
TAAGTCTGATTTAGCACCGGAATGAGATCATCAATGTATCAAAGCCTTCCCTTTTAACTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400045174
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400045174 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G17940.1 |
+1 |
4e-60 |
200 |
129/286 (45%) |
Tetratricopeptide repeat (TPR)-like superfamily protein | chr4:9965787-9966778 FORWARD LENGTH=274 |
Transcript Sequence (1311 bp)
>PGSC0003DMT400045174 1311 pgsc_dm_v3.4
CTCAAATAAATATAAAGTGTTCAAAAAAAAAAGAGTAGTTGTTTCAATATGAGAACTGTC
CTTTTCCGAACCGGTTCCGGCTCAATTCCGGCGGTTATTCCCGGTTCTCCGAGAGTTTCT
GTTCCCGGTCGTGAATCCATTGGTAAAGTGTTTAACGGAGAGAAGAAGAAGAAAGGATGT
TCTTCTCCTATGATCTCTCTGAGTTCGGAAGTCAATCGTCGCGGTATACGCCGGGTTTCA
TCTGAATCCGACGTGATTCGGTCGGGTTTTGAAGGTTCGAGTGTAACTAGAAAGTTGAGT
AAGATTGGATCGAGGTCATTATCGTCAAAAATACCGGAGGAGGATTGCGGTTCTGAACAG
AATGAGTTGGAGGTTTTGCAAAGTATTGGATCACTGAGTTTGACGGAAGATCTACGGAGT
TACGCCGGAGACTGGAATAGGAACAGTATTCCTGTCGATGAGCTTGTATTTCCCGGCGGT
GGAATCGGCTCCACCAAAAACAGAAAATTTGGCGGCAACGGTGGCGGTAGAGATGAGTTC
GATGCAGATAGTTTAACCGGCGGAAACTCAGATCCAAGGAAAATTGGAGCATATTATAAG
GAAATGTTGAATTCAGATCCTATGAATTCTCTTCTTCTTAGAAACTACGGCAAGTATTTG
CATGAGGTGGAGAGAGATTTTGTGAAGGCTGAAGAATGCTACGGAAGAGCTATACTTGCA
AGTCCTGGGGACGGAGAAGTGCTTTCTCTGTATGGCAAATTAGTTTGGGAGACGCAGCGA
GACGAAAACAGAGCCAAATCTTACTTTGATCAAGCTGTTCACGCTTCTCCTAATGACTGC
ACTGTGTTGGGATCGTATGCACACTTCATGTGGGAAGCCGAAGGAGAGGAAGACGAAGAC
GAAGACGACGAAATAGAAACAGTAGGAGCCGGAGCATCAACGGTTGCAGCTTACTAGCTT
TGCAGAAAACAGATGGAACAAATATGTACTACAGAAGCTAGCTAGTATTATAGATGAGAG
AGAGCTAATTAACTTATGTTAATGTACTTGTAAAATGTGTAAAAAGAAGTTAATAAAAGA
GGAAGTATGTATAACTTAAATTAACTAAATCGATGTTTTAATTGAAAATGAAGAGAGAAG
TCTGTAGAAGAGTGTGAAAAGAGAAGAAATTACACTGGAGGTAATTATGAGTGTGTCTAC
AGTTTGAAGTTTTGTTGTACATGTACTATTAACTATTATTAGTGTTTCTTGTAAGTCTGA
TTTAGCACCGGAATGAGATCATCAATGTATCAAAGCCTTCCCTTTTAACTT
