Microarray Probes on PGSC0003DMT400044435
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28349_PI426222305 |
JHI_St_60k_v1 |
TTATTCGTAGTCATTAACGTGTTGTGTATACTATCAATGGGAACTAGTTCCATGACCACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044435
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044435 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G06620.1 |
+3 |
9e-138 |
407 |
209/357 (59%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |
Transcript Sequence (1611 bp)
>PGSC0003DMT400044435 1611 pgsc_dm_v3.4
TGAAAATTTTGACTCCGCCATCATACTGACATTCAAATTTTGTCCATCCATTCTTATAAT
CTCATAAGTGAAGTAAGTAACTTTGTATTTACAATAATATGGAAAAAGTAGAAGAGAAGA
TGGTTTTCTCCAGAGATGAAGAATTTCAGGCTACATTACAACCAAATTATGATAAACATA
GTGAATTAAAAGCCTTTGATGACACAAAAGCTGGTGTCAAAGGGCTTGTTGATGCTGGAA
ATAGTACTGAAGTGCCTCGGATATTCGTTCATCCACGAGAAAGCATACATGACTCCTCAG
GCTTTACTGAGAAGGAGTTTGTTTTTCCAGTAATAGATCTTGAAGGCATTGATAATCCAA
TGAGGCATAAAGAGATTGTTGACAAAGTTCGAGATGCATCGGAGACATGGGGATTTTTTC
AAGTGGTCAATCATGGCATTCCATTACCTGTCCTTGAAGAAATGTTGCAAGGAGCACGAA
GATTTTTCGAGCAAGATGTGGAGATAAAGAAACAATATTATACTCGAGATACTACGAAGA
AAGTAGCACATGTTAGCAATTTTGATTTGTTTAGCCCCTCTGTTCCAGCAGCAAGCTGGA
GAGACTCACTTTACTGCTTTATGTGTCCTAATCCTCCTAGTCCAGAGGAATTTCCAACAG
CATGCAGGGAGATTTTGATTGAATTCTCTAAGAAGATGATGAAATTGGGCTACTCATTAT
TCGAATTATTGTCCGAGGGTCTTGGTCTCAATCCTTGTCATCTTAAAGATATGAACTGTG
CTGAGGGGCTATCAATTGCCCAACATTACTATCCAGCATGTCCTCAGCCAGAACTCACCA
TAGGCACCAGACAGCATTCGGACTGTGTTTTTATCACAGTGCTTCTACAAGATGATATAG
GAGGTCTCCAAGTCCGTCACCAAAATCAGTGGATTGATGTTCCTCCTACACCTGGTGCTC
TAGTAGTAAATATTGGAGATCTGTTACAGCTCATATCAAATGACAAGTATATAAGTGTTG
AGCACAGAGTATTGTCAAACAAAGTAGGTCCAAGAATATCAGTGCCATGTTTCTTCAGCA
CTGGTGCATTTCCCTCTCCAAGGATTTATGGACCAATTAAGGAATTGTCATCAGAATGTA
ATCCGCCAAAGTATCGTGCAACCACAGTGAAGGAATATACTGACTACTTCCGCAAGAAAG
GCTTTGATGGAACTTCTACACTGCTGGATTACAAGATCCTGTCCTAAAATTGGAGTAATT
TAGTGTAATGCATATCAGAGCTGTGAAATTGAACATGTGATGTGCAATTAGCTAATAAGA
TAGTCTGTAGCAAGTGGAATTCACATCAGGCTTTGATGATCGCCTGATATTGGATTCCAT
CTATTTCTTTCGAGATTGAATTCAGCATGTCACCATTTGATGATTCTCATTTCTCAGTGT
TAGTCATGGTGACAAAAGTGCAAAGGATGCCTTTAATTTCATATTCAATGTTTTAAGAAA
ACAAACTCATTTAGTCACACGTGCTATAGCCTGTATTCTTGAATATTTTGGTTATTCGTA
GTCATTAACGTGTTGTGTATACTATCAATGGGAACTAGTTCCATGACCACA
