Microarray Probes on PGSC0003DMT400044407
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28288_PI426222305 |
JHI_St_60k_v1 |
TTGTTATTATTGGTGATCTCCTTCAGATCCTATCAAATGACAAGTTTGTAAGTGCAACTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044407
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044407 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G06620.1 |
+2 |
3e-106 |
322 |
172/354 (49%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |
Transcript Sequence (1292 bp)
>PGSC0003DMT400044407 1292 pgsc_dm_v3.4
TCTCTTTGTACCAAATCTTGTAAACTTTCTCAAGTTGAATTTAGCAATGGATTATGATCC
ATCGGATGAGAAAAAGGCTATTGATGATACAAAAGCTGGCGTTAAGGGACTAGTTGATTC
TGGAATAGTCGAGATTCCAAGAATTTTCATTAGGCCACCTCATGAACTTGCTGAGGAGTT
GAATATGTGCAAGTCAACTCTACAGGTTCCGGTGGTGGATCTAAGTGGCATAGAAGCTGA
AGATCGGCGTAAGATCATTGTTGATGAAATAAGGGAAGTATCTGAGAAATTGGGCCTTTT
CCAAGTGATAAATCATGGGGTTCCTTCAAGTGTTTTGGAAGGAATGATTGATGGGACTCG
TAAATTTCATGAACAAGATGTCAAAGTGAAGAAAGAGTACTATTCGTCTGATCCAACAAC
CAGACGAGTTAGATATGATGGCAATGTTCATGTGTACAAAACAAAAGGAAAGACTGCACA
CTGGAAGGATACATTGTATGTTGCTGGGCTAGTTTCTGGTCACATTGAACCTGAAGAATT
ACCAGAAGTTTGCAGGAAGGAATACGTTGAGTACACAAATCATGTCGATAAACTAGGGGA
AATTCTTTTTGGCATACTATCAGAAGGTCTTGGGCTAAAACCGGATCAGTTGAAAGCTAC
AGAATGTGCCAAAGAACAAGGGATGGCATGCCATTACTACCCGACATGCCCACAGCCAGA
GCTAACTCTTGGTACTGGTAAGCATACAGATCCTGTTTTCCTTACGTTTATCCTTCAAAA
TCAGATTGGTGGGCTCCAAGTCATGTGTGATAACCAATGGGCGGATGTTGAACCGATTGA
ACATGGTTTGGTTGTTATTATTGGTGATCTCCTTCAGATCCTATCAAATGACAAGTTTGT
AAGTGCAACTCATAGAGTTGTAGCAAATAAGGTAGCAGAACCAAGGATTTCAGTGATATT
CTTCTTCAGTGGAGTTTCTACACCTCCAAAGATGTTTGGTCCAATCAAAGAGCTCATATC
AGAAGAAAATCCCCCACTATATAAACAAGTTCTAGTAGTTGATTATGTCTCAAATTTTTT
GTCCAAGCCACTTGATAAGACTAGTCTTGATCTTGTCAGACTCTGAAGAATCGCTACGCG
AAAATGACCATAAACCATCAGAAAAGCCTATCATCATTCATACAGAACTATGTCATAGTT
TGTGATTTGCTGTAAAATAATGTTCATTTTCATGTTGAAGGAACTATTGAAAGCAATAGT
GCTTTGAACTTTTATGTGAAACTTTATCACAA
