Microarray Probes on PGSC0003DMT400044402
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28252_PI426222305 |
JHI_St_60k_v1 |
GTTACCAAGTTTTTCTCGAAGCCTCTCGATAAGACTGGTCTTGATCTTTTCAGACTGTGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044402
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044402 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G06620.1 |
+1 |
9e-83 |
259 |
155/350 (44%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:2025618-2027094 FORWARD LENGTH=365 |
Transcript Sequence (1038 bp)
>PGSC0003DMT400044402 1038 pgsc_dm_v3.4
ATGGATTATGATCCATCAGATGAGAAAAAGGCTATTGATGATGCAAAAGCTGGTGTTAAG
GGACTTGTTGATTCTGGAATAGTCGAGATTCCAAGAATTTTCATTAGGCCACCTCATGAA
CTTGCTGAGGAGTTGAATATGTGCAAGTCAACTTTACAGGTTCCGGTTGTGGATCTAAGT
GGCATACATGTTGAAGATGGGCGTAAGAAGATTGTTGATGAAATAAGGGAAGCATCTGAG
AAATGGGGCCTTTTCCAACTGATAAATCATGGGATTCCTTCTAGTGTTTTGGAAGGAATG
ATTGATGAGACTCGTAAATTTCATGAACAAGATGTTGAAGTGAAGAAAGAGTACTATTCG
TCTGATCCAACAGCCAGACAAGTTAGATATGATTGCAATCTTCATGTGAACAAAACAAAA
GGAAAGATTGCAAACTGGAAGGATACATTATACATCTCTGAGCTAGTTTCTGGTCACATT
GAACCTGAAGAAATACCACAAGTTTGCAGGAAAACATCCGTTGAGTACATAAATCATGTT
GTAAAACTAGAAGATATTCTTCTTGGCTTACTATCAGAAGCTCTCGGACTAAAGCCAAAC
CACTTAAAAGCCACTGAATGTGACAAAAGACAGTTAATGGTATGCCATTACTACCTGGCA
TGCCCACTGCCAGAGCTAACTCTTGGTACCAATAAGCATACAGATCCTGTTTTCGTTACC
ATTCTGTTTCAAGATCAGAATGGTGGGCTCCAAGTCATGCGTGATAACCAATGGGCCGAT
GATACACCGATTGAACATGGTTTGGTTGTTAATATTGGTGACCTCCTTCAGAGTTGTAGC
GAAAAAGATAGGACCAAGGATTTCAGTGGCATGCTTTTCAACGGAGTTTCTACCTCTCCA
AAGCTGTATGGTCCAATCAAAGAGCTCATATCTGAAGAAAACCCCCCACTATATAAAGAT
TTTCAAGTAGTTGATTATGTTACCAAGTTTTTCTCGAAGCCTCTCGATAAGACTGGTCTT
GATCTTTTCAGACTGTGA
