Microarray Probes on PGSC0003DMT400044379
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28286_PI426222305 |
JHI_St_60k_v1 |
GGTTCCATCTCTTTGTTCTTTAGTTGGAACACCATATTGTAAAAATTTTGGTGATGGATG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044379
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044379 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G23240.1 |
+2 |
4e-40 |
142 |
93/161 (58%) |
ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218 |
Transcript Sequence (984 bp)
>PGSC0003DMT400044379 984 pgsc_dm_v3.4
TTGGACTATAACTTGAAAAAACAGAGCATCCGCACAAAAAACAGAGCATCCCCCAAAAAA
AAAAAAACAGAGCATTTATTTTCTCTCAAAAACATAAATGGATTCTTCTTCTTGTTCATC
TCAATTCTTCTACTCAATGAATTGTGATTTAAATTCTTCAGATTCTTCATATGAATGGTC
CAATTTCAACACACAATCTTATCTCCCTTTCAACGTTAACGACTCCGAAGAGATGCTTCT
CTTCGGAGTTCTTAACGCTGCTCAAGAAACAACATCAGAAACAATTACATCGTATCGTGT
TAAGGAAGAGGAAGTCAGCTCAGAATCAGAGGTGATTGAGGCAAAACCCGCGAAGGAGAA
GTCGTACCGAGGTGTTAGGAGGCGTCCATGGGGGAAATTCGCAGCGGAGATAAGAGATTC
TACGAGAAATGGTGTTCGAGTATGGTTAGGGACATTTGATAGCGCGGAGGATGCAGCGTT
AGCTTATGATCAAGCTGCGTTTTCAATGAGGGGTACTTCTGCCATTTTGAATTTTCCAGT
GGAGACAGTTAGGGAGTCGCTACGTGACATTGACATGAAATGTCACGTAGATGATGATTG
CTCCCCTGTAGTGGCGCTAAAAAAGCGCCACTCAATGAGGAAAAGGAGCACGAATTCCAA
GAAAAGCAGTAGTAGTAGTAAAGTAGTGAGGGAAGTTAAAATGGAAAAGGTAAATAATGT
AGTTGTGTTTGAAGATTTGGGGGCTGATTATTTGGAACAACTTTTAAGTAGTAGTTCAAG
TGATCAAAGTAGTTGTGATGCAACTTATTTTAGTCCATGGTAAAATCAAAGATTAATCCA
TGGTTTTTTTTTATTAATTATTTTATTTTTGTTACTTTTTTTCTTGGGGTGGGGGTGGGG
TGGGGTGGGGGGAGGGTTCCATCTCTTTGTTCTTTAGTTGGAACACCATATTGTAAAAAT
TTTGGTGATGGATGTATTTAAGTT
