Microarray Probes on PGSC0003DMT400044378
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28361_PI426222305 |
JHI_St_60k_v1 |
GCTGCGTTATGGATATGTAGTATACTTGGATAATCATGTGTTATGTGCCTTCTTTATAAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044378
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044378 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G43400.1 |
+3 |
0.0 |
749 |
392/664 (59%) |
Uncharacterised conserved protein UCP015417, vWA | chr5:17426182-17428149 REVERSE LENGTH=655 |
Transcript Sequence (2238 bp)
>PGSC0003DMT400044378 2238 pgsc_dm_v3.4
AAAATAATGAGTTCTCCATTTTCAATTCCACATTGAACGTGTCCAAAACGTGTTTTTATA
GTAGTATTTTCTCACTGAAGGAACTTCTTCCATTCATTCATCAAATGACAACAAAATCTC
TGCTTGTTGGTCCGCCGGCGCTCCGCCGTGAACCACCGTTATCCGCCCTAACACTCAACG
ACCCCGAAACCGTCGATATCCCCATCACCGGTCCATCTGATGAAATAAAAAATCTTGATC
TTTCAAAGCTTCCTTTAAGGGGTTTGACGGAGAACAATTCCGCCACTTTCATATCTTCTG
GTAATCCTTGTTTGGATTTCTTCTTTCATGTTGTGCCCGATACACCGCCGGATGATTTGA
TCGGACGGCTGGAATTAGCTTGGGCTCACAACCCATTGACGGCTCTTAAACTGATTTGCA
ATCTCAGGGGCGTTAGAGGTACAGGTAAGTCTGATAAAAAAGGGTTTTATGCTGCTGCGT
TTTGGTTACATTATACTCATCCTAAAACCCTTGCTTGTAATGTTCATGCTTTTGCTGATT
TTGGGTATTTTAAGGATTTGCTGGAAATTTTGTATAGAATTCTGGAAGGACCATTTGTGA
GGAAAAAGGAGAAAGAGGAGAGGGAGAAAGCGAGGGGTAGAGGTGGTGGTGGTCGTGGTA
GGTTTAAGAGGGTGAGTAGGCCTAGTGAGGATAATAAGGAGAAGAAGATGAAAGTTAAGA
AAAGTTTGGAGGAATTAAAGGAAGAAATTAAGGCTGAACAAGTGAAAGCTGGGGTTTTGA
GGAAGGAGAAAGATGTAGCTAAGGCGGAGAAGGCGTTTGAAAAGTATTATTCGGATGAGC
ATTATAGGCGTTTACATGATAAGATTTCGGATTTCTATGCTGAGCTTTTGAGGGAGGATC
TAGAGAAGTTGAATTCAGGGAAGAGTAATGAGATTAGTTTAGCTGCAAAATGGTGTCCGA
CTGTTGATTCTTCGTATGATAAGGCTACTTTGATGTGTGAGAGCATTGCGAAAAAGGTGT
TTCCAAGAGAAAGTTATAGTGAATACGACGGGGTTGAAGAGGGTCATTATGCTTATAGGG
TGAGAAATAGATTGAGAAAAGATGTGCTTGTGCCTTTACATAAGGCATTGGAATTGCCGG
AGGTGTATATGAGTGCTAATAAGTGGAATTCCCTGCCGTACAATAGGGTGGCGTCAGTAG
CTATGAAGAACTATAAAGGACACTTTTTTAAGCATGACCAAGAAAGGTTTAAAGCATATC
TTGAGGATGTGAAGTCGGGGAAGGCAAAAATTGCAGCTGGAGCTTTGCTGCCTCATGAGA
TTATTGGGGCATTGGAGGACGGAGATGGTGGAGAAGTAGCTGAACTTCAGTGGAAAAGAA
TGGTTGATGATCTTTGTAAGAAAGGAAAATTAAGTGATTGTATTGCGGTATGTGATGTTT
CTGGGAGTATGGGTGGGATACCGATGGAGGTCTCTGTGGCACTTGGTGTCTTGGTTTCAG
AATTGAGTGAGGAACCATGGAAGGGAAAATTGATCACATTCAGTGAGTCACCTGAACTGC
AGAAAGTTGAAGGTGATACTCTAAAAGAGAAGACTGAGTTTGTCAGAAATATGAACTGGG
GTACGAACACAAACTTCCAGAAAGTTTTTGATACTATTTTGGAAGTGGCGGTACAAGGAA
ATCTAAGTGAGGATCAAATGCTAAAGAGGGTGTTTGTGTTCAGTGATATGGAATTCGATG
AGGCATCAGAAAATGCATGGGAGACAGACTATCAGGCAATTCAACGAAAATTTTCAGAGA
AGGGATACAACAATGTGCCCGAGATCGTGTTTTGGAACCTTCGAGACTCAAGGTCGACTC
CAGTTTTGGAAAATCAGAATGGTGTAGCACTTGTGAGTGGGTTTTCTAAGAATCTGTTGA
CCATGTTCTTAGAGGGTGGTGGAGTTGTTACTCCTGTGGATGTTATGGAGCTTGCTATTT
CCGGCGAAGAGTACCAGAAGCTAGTTGTTTTAGACTAATGTGTGAGTTACTCACTACATT
TTGGTTGTTATTTTAAAACTATATTGTCCAACTTTGTTACACAAGTCTCTCTTAGATGAA
TGAATTGTGTGTTACTTATCGTCAACTGGTGGACATTAAGCTGCGTTATGGATATGTAGT
ATACTTGGATAATCATGTGTTATGTGCCTTCTTTATAACTACTATTGTGTTTTTGTGCAT
CTTTTGTTCTGTTTTCTT
