Microarray Probes on PGSC0003DMT400044238
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28240_PI426222305 |
JHI_St_60k_v1 |
GGAGTTACATCTATAATAAAGGCATAGATGGAACTTCTGCATTGTTGCGTTACAAGATAT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044238
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044238 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G03410.1 |
+1 |
2e-65 |
112 |
62/110 (56%) |
2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein | chr1:844782-846574 REVERSE LENGTH=398 |
Transcript Sequence (1828 bp)
>PGSC0003DMT400044238 1828 pgsc_dm_v3.4
CTTTGAGATAATTTCCAAAGAACCATCACATAATTTAGGTGTGTAACTGACAATTCATGC
TCTTATTCTTTTATTTTATTTGATAAGGGGAGTGTCACTATAAAAACAGAGTTGAAGGAA
GGAAGAAAAATAAGAAGAGTTGTTCCCCCCTCTCTTTTTACCCATTTCTGTTTACATTTT
GCTTTTCACAAATAATGGCCGTCTCTAGTCATGACAGAATGAGTGAATTAAAAGCATTTG
ATGATACTAAGGCTGGTGTCAAAGGGCTTATTGATTCTGGAATCACTAAAGTTCCTCAAA
TATTCATTCTACCCCCAAAAAACAGGGCGGAAATATGTGAAACACACTTCGTTTTTCCAG
TGATAGACCTTCAAGGCATCGACGAGGATCCAATCAAGCATAAGGAGATTGTGGACAAAG
TTCGAGATGCATCGGAGACATGGGGTTTCTTCCAAGTGGTTAATCATGGCATTCCAATAT
TCATCCTAGACAAAACATTGCAAGGAACGCGCAGTTTTTCGAGCAAGATAACGAGGTTAA
GAAACAGTATTACACTCGAGATAACGGGAAAAAGGTTATTTATATGAGCAATTTTGATTT
GTATAGACCTTGCGTTCCAGCTGCAAGTTGGAGAGACTCACTTTTCTGTTTCATAGATCC
TAATCCTCCTACTCCACAAGAATTTCCAACAGTATGCGGGTGGGTAAATATTCATTTCTT
AATTCATAATAGTAACTCGTAATTTTAACACCAATTAAGCCTACTCTGTTTTGTCCTGTT
TCATCAAGCAGGGAAATACTAATGGATTTCTCCAAGGATGTGACGAAATTGGGCTGCTCC
TTGCTTGAATTATTGTCTGAAGGTCTCGATCTTGATCATTGTCATCTCAATGATATGGAT
TGTGCTAAAGGGCTTAGTGTTTTGAGCAATTACTATCCATCATGCCCTCAGCCCGAACTC
ACCATGGGCACCATACAACATTCCGATGGTGATTTTTTCACAGTTCTTCTACAAGATGAA
ATCGGAGGACTCCAAGTTCTTCATCAGAATCAATGGGTTAATGTTCCTCCTATACCTGGT
GCTCTCATCGTTAACATTGGAGATTTTCTTCAGGTTAAATCTCTTTTTTTCTAATCATAT
CTGATAGTAAACAAAATTAATTGTTGAAGCCATTTGAAAACGGCATAATACATAAACAAA
TTCTCAAATTTGGTCTAAGCTGGCAAGTAAGCACTCCAACTTTGAGAGTGCATATCTTTT
GGACTATGTCTCGTGGACACCATGACACATAAGATGATAATTTTGTAAGTATTGGAGTGT
TTACTTACGAGCTAAGGTGAAAATGAAAATTCATATATATTTTCAGACATATTTGTGTAA
TTTGGTACTGAAACCGGAGGAGTGGTTATTTTTTTGCAGCTCATGTCAAATGACAAGTAC
CTAAGTGTTGAACACAGAGTAATTGCAAATAAAGATGTGTCAAGAATGTCAGTTGCCTGC
TTCTTTGGTGATAATGTGCAATCTTCCAAGCTTTATGGACCAATTACTGAATTATTATCA
GAAGATAATCCTCCAAAATATCGCGCAACCACATTGAAAGACTACAGGAGTTACATCTAT
AATAAAGGCATAGATGGAACTTCTGCATTGTTGCGTTACAAGATATAATAATGTATATTA
TTACTATTCCTTTTCGTTCTAGCTATTTGTCGTGTTCATTTCATACTTCTGCAGATTGTA
CTTTTGAATTTGAAGTGTTGTTTTTTGTATTAGTGAGACAATGTTTAACCAAAGGAAACA
TCTAATAAATAAGGATAACTAAATAAAC
