Microarray Probes on PGSC0003DMT400044232
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_28276_PI426222305 |
JHI_St_60k_v1 |
GGACATGGAAGGGGATCAAGAAATGTAGTTTTACCTATTCATTTAGAGTCATAATGAGAA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400044232
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400044232 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G43420.1 |
+3 |
1e-86 |
273 |
152/287 (53%) |
RING/U-box superfamily protein | chr5:17451790-17452917 FORWARD LENGTH=375 |
Transcript Sequence (1333 bp)
>PGSC0003DMT400044232 1333 pgsc_dm_v3.4
TTTCTCTCATTAAACCCCTACACTAAATTTCTCCATAATTTTGTCCATTTTCTCATAACA
CATTTTTCTCCACAACATGTTCATGTGCATTCAAGATCCAAACATAACCATTTGTCCCAC
TTTTGTCCTTACATAAGTTTTTTTTTTTTAAAAAAAATAATCTCATGGATCTTATGAGAC
TAAAATATTTTGAATCTTTTGCACACATGAAAAATCCTCCAATTAGTCCTCCAATTTTTG
GTTCACCTATACATTCTTCATCAAATCATGCTGGATTTCCAATTATAGCAGTTGCTATTA
TTGGAATCTTAGCAACTGGTATTTTACTAGTTAGCTACTACATTTTTGTGATCAAATGTT
GTTTGAATTGGCACAGAATTGATCTCTTGAGACGATTTTCGATCTCAAGAAATCGACGTG
TTGAAGACCCTTTAATGATCTACTCACCAGCAGTAGAAAATCGGGGATTAGACGAATCAG
TGATTCGTTCAATCCCCGTATTTAAGTACAAGAAAAGGGAAGAAAATTCAAGAATTCATA
GTGAATGTGCTGTTTGTTTAAATGAATTTCAAGAAAATGAGAAGTTAAGAGTTATACCAA
ATTGTGCACATATTTTTCATATTGATTGTATTGATGTTTGGTTACAAAACAATGCAAATT
GTCCACTTTGTAGAAATAGTATTTCATCATGTACAACAATTAACACAAAGTTATTGTTGT
ATCCTTTGGATCCAATCATTGCTCCAAGTTCAACTCCATATCAAGATCCAAATCTTGAAA
ATTTTAGAGATGAAGATTATGTTGTGATTGAAATATCAAACAATAATCAAGAAAGGTTGA
TGAATACAGGGGAAATAACAGGGCATTTTTCGATTAGTCCATCGCCACGAAAAACAGAAC
AACAAAAGGTTTCATCAAGAAAATGTAAGAAGTTTAGACATGTTACAAGTATGGGAGATG
AGTGTATTAATATGAGGAAGAAAAATGATGAATTTGATTCAATTCAGCCTATAAGAAGAT
CATTTTCAATGGATTCAGCAACGGATCGACAACTTTACTTAGCTGTTCAAGAGATTATAA
TGCAGCAACAAAGGCAAGTGAGTGATGTTAGTCCCTTTGAAAGTAGTAGTAGTAGAGTAA
AAAGATCATTTTTTTCATTTGGACATGGAAGGGGATCAAGAAATGTAGTTTTACCTATTC
ATTTAGAGTCATAATGAGAAAATGATTTAATTTTTATTGTAATCTTTTGTGTGTAGAAAA
ATAGTTGTTGATATTAAAGTAGTTTTAATAGAAGTTCAACTTTTCATTCTCTTGATAGAC
TCGAACCTACAGT
