Microarray Probes on PGSC0003DMT400043945
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_3323_PI426222305 |
JHI_St_60k_v1 |
CCATAATATGTTGGGTTTTCTAGCTTTTTTCTAACAGCTGATCTAGAAGATCATATGCCT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043945
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043945 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G33565.1 |
+1 |
4e-18 |
84 |
40/110 (36%) |
RING/U-box superfamily protein | chr4:16136821-16137924 FORWARD LENGTH=367 |
Transcript Sequence (1017 bp)
>PGSC0003DMT400043945 1017 pgsc_dm_v3.4
TCTGACTAAGTTTGAGAAGTTTGTGCATTGATGAGGTCATGCAATTTGAATTTCAGGTGC
AGTATATGCTTATCGGAGTACCAGGAGAACGAAATTCTGAGAATTATGCCCAAATGTGGC
CATAGTTTCCATCTTTCATGCATTGATATATGGCTAAGAAAACAGTCTACCTGTCCAGTT
TGTCGTCTTTCCGTACAGGAATCTATTGAAAACAAACAAAGGCGCCCTGCAATGCTTGGC
AGGGATCAAAACTCTGACAGTTCTGAGATTTCATTGGAGCATTCAAGGCAGTGGTTTCTA
CGTACTGCTGAACGGTCACAAGGTACTGTAAGTAACAGCAATGAAGCAGTTTCTGTTTCA
ATTAATCCTGAACCTGAGGTCTCTCGGGAAGCAGAAGCAAGGTCATGACGGAAGGCAAAT
ATAGAGGTACCATAAGAAATTATGCCTTCTGTTTGCATTCAGATGTTTCCTTGTATCAGA
CCTATCTTATTGGAGACTGACAAATGGGACTGATTCTGAACAAAGAGAATCTGAAGACAC
AGAGGAAGGACACAGAAACTTCTGTAGATGAATGTTGCATATAACCGGTTAGAAGATCTA
GTTGCACTCTTTTAGCAATTCGGAGATTTTGGACCAAGTTTGTGGCACACTGGTTATCCT
ATCAAAACACAGTGCATCTTATATGATGTTGTACAATGTCAAATCTTCTGTAATATCACT
GTAAAGAAGGCGTTTAGAGTCTCCGTTTTTTATCATAGACATTACCAAAGTAGACAACGA
ACTAAAGTCTTATTGAAATACTCTAGAATTGGCTCATTTGAGGGTCATATACTCTGTAAG
AATATGAGCCTCCATACACCACTTTTAGTAATTTACAGTCAAGTTATGCTTATAAGTTTT
TACCTCACTGCAGTTCTGGTTTCTGATATGCAATATCCAGAATATGATGAAACCATAATA
TGTTGGGTTTTCTAGCTTTTTTCTAACAGCTGATCTAGAAGATCATATGCCTATAAA
