Microarray Probes on PGSC0003DMT400043382
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48526_PI426222305 |
JHI_St_60k_v1 |
GGAAGCATCCTAAGTCATGTAAATGTTTGTCTTTTGATTGTCACAATCTGAACAAACATC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043382
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043382 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G32910.1 |
+3 |
1e-46 |
179 |
105/236 (44%) |
DCD (Development and Cell Death) domain protein | chr2:13959685-13961989 FORWARD LENGTH=691 |
Transcript Sequence (3492 bp)
>PGSC0003DMT400043382 3492 pgsc_dm_v3.4
TAAAACGCTAAAATTCAATTTGGTCTCTCCCTAGTCGAGTGCAACCCTCACTGCTTCTCC
GACGAGTTTTTCCGGCGTCAGCTTCTCCGACCAGTTCCTCACCGTCTCTTTCTCCGGTAA
ACTTTACTGGAACGAGTATGGCCAAGAAAAACAAGAGAAGGAGAAATAATGCGGCTGCAT
CTAGTTCTGGAAGAGTACCTCAAGACAATAAAACCCCAAAGGAACTAATGGCTAAAGGTA
AACTTGCAAAAAAATCCAACTTAAACTCTGCACAAATGAAAGAAGCTGACGCCACTCCAC
AGTCTCAATCCAGAAACATGGAGAAGAACATAAAAGATGGCAACCAAGGAAATAATGTTG
AGGCCACTCCACGATCTCAATCCAGAAACAAGGAGAAGAACATAAAAGATGACAATCAAG
GAAATAATTTTGACAAAAAAGATGCTAGGAAGTCCCTAAACATAAAAAGTGGAAACAAAG
GAAAGGGAAGTGCAAGTGAAATGAGGGTAGATGTGGAGGACGGAAAAGCTGACAAGGGTA
TTGGTGGAGTGATTTTCATGTGTAATGCAAAGACCAAAGATGATTGTTTTAAATATCATG
TGATGGGTGTCTCAGCTATGAAGAAAGACATTATTTTGGGAATCAAACCTGGTGTCAAGC
TTTATCTCTTTGATGTTGATCTTAAGCTCATGTATGGTATTTATGAGGCTTCATCTGCTG
GTGGAATGAAACTTGAACCAGCGGCATTTGGTGGGGACTTCCCAGCGCAGGTTCGCTTCA
GGATTTACAAGGACTGCCTTCCATTGACGGAGAATTTGTTCAAGAGAGCAATTCAAGAGA
ATTATGATGAAAGGACTCACAAGTTCAAGACTGAGTTGACATTTAAGCAGGTGACAACAC
ACTTCCCTCATTGACAAGTTCTACTTGGAGATAGTGTGTTATTTACCTAGCATTTGATGT
CAATTTTGTGGCCCTGTTTTCGCCTTTGAGCAGGTAGGGCAGTTGAAAAAGCTGTTTACG
CCAGCACCATGGCTACATCCAACTTCCAAACATTCTGTGTCATATCCAGTTAGTCTGCCC
CCATCAGCAGCACCTTTACCTAGCAAGGAACCTTCCAGGGAGCATGTTGGATTGCAATAC
GGAAGAAGCAAAGCAGGTGAGAATTTTTCATCATATGGTCATGAAAGGGAAAGGCAGCAG
CATGCAGGCCGCCTTATCATGCCTAGAGAGGTTGACAGTGAACCTCGTTTCCTCACTGAG
AAAGAATATAGAAGCTATGGTCTTCAATCAGCAAAGCATCCGCAGGCCTTTGCTTCTGCA
GTAGTTGACCGCACATTGGATCATTATGAATCTGAACAAGGAAGGGAACATCTCCGAACA
AATCCCACTGGGATTACTAGTGATGCGGCTTTAGCACGAAAAGAAACTGTACTTACTGAA
CCTTTGTTTCCAAGCGAAAGGGAGTATCGAACTTACGGCCTCAAGTTTCGCAGTGAAATA
CCTGCTACTGTTGCTCCTGCTGTGGAAAGTGGTGCTACAGGAATTTCAGCCACACCTACC
AATCATAGTTTACTAAATCATGTTAAGGATAAGTATGATCCTTATGCCGAGAGTACTACC
TCACTTGTAAACCGATATCTCTCTCTGCCTCGGACAGTGGTAGCACCTGTAGTGTCATAC
TCTTCGACAGGCAGGGAGTCTTTTGTAAGTGACCCCTATTCTGCAATTGGCATCAAAGGC
CATACGGGAAAATTCCACGCTGAAAATGAAGGAGCATATCCACCCACGGGAAGATTCCAC
GCTGAAAATGAAAGAGCATATCCACCAACGGGAAGATTCCACACTGGAAATGAAAGAGCA
TATCCACCAATGGGGAGATTCCACACTGAAAATGAAAGAGCATATCCACCAACGGAGAGA
TTCTACACTGAAAATGAACGAGCATACCCACCAACGGGGAGATTCCACACTGAAAATGAA
AGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACG
GAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAATGGGGAGATTCCACACTGAA
AATGAAAGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCA
CCAACGGGAAGATTCCACACTGGAAATGAAAGAGCATATCCACCAATGGGGAGATTCCAC
ACTGAAAATGAAAGAGCAAATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCA
TATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGA
TTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAA
AGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACG
GAGAGATTCAACAGTGAAAATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAA
AATGAAAGAGCATATCCACCAACGGAGAGATTCAACAGTGAAAATGAAAGAGCATATCCG
CCAACGGGGAGATTCCACTCTGAAAATGAAAGAGTATATCCATCAACGGAGAGATTCAGC
AGTGAAAATGAAAGAGCATATCCACTAACGGGGAGATTCCACACTGAAAGTGAAAGAGCA
TATCCACCGACGTGGAGATTAAACACTGAAAATGAAAGAGCATATCCACCATATGCTCCT
CAATTACCACCAGAGTACGGCTTGAAATATCACCATGTTAGGGATGAGCCTAGGTACCCA
GCTTTAGTCTCATCTCGCTATTCCCTTGGGGAACCATCTGCACCTCGTCGCTAAACTTCT
GCTATCTGCATCCCTCAAATATCTTCCATGGCTCTGGTAAAGTTATGCTTATGAAACTGA
TGAACTTTAGGCCCAGTTCATCGACAAGGAACTTGCATTTCTCAGATGTGCTGAGGGCAA
AGATAAGGTCAATTATACATGTCTTCTCTGGTGGGTTCTGGATTAAAAATATTACAGACT
GTATTTCCCATTTTCTTCCTGTACAAGGGGAGAAACGTAATACCTGAATCTTGACACCTT
CCCTTTGGTGTTGTTTCTTATATTTGTTATTTGTGACATAAAGGAGAAACTTGATGCTGT
TGATTTATTTCGTGCATTCTGATGTTTATTCATGTGTATTAGGGTCATTATTGTGTTAAG
GATGTAGAACATAGCATGTATACTTGAGATTCACAATGTGCCATCACTATGGATTACACT
TCATAGCGGAATTGGCCGCTGCATGAGGTTATATTGATCTGTGACTTGTTTTTGAGCTTA
AGGGTGTGCAACTGAGCTGGAATATGTATGCATTGGAGTTGTATTTCTTCTACTGCAGGA
AGCATCCTAAGTCATGTAAATGTTTGTCTTTTGATTGTCACAATCTGAACAAACATCAAT
GTTTTTTCTCTT
