Microarray Probes on PGSC0003DMT400043108
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_18460_PI426222305 |
JHI_St_60k_v1 |
CTTGTGTAATCACAATCTATCACTAGTTACCAATCCTCAACCCATGGGTCAATATTTGAC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400043108
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400043108 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G66120.1 |
+1 |
6e-166 |
475 |
247/443 (56%) |
AMP-dependent synthetase and ligase family protein | chr1:24612640-24614690 FORWARD LENGTH=572 |
Transcript Sequence (2081 bp)
>PGSC0003DMT400043108 2081 pgsc_dm_v3.4
CTCTCCAAATAGAAAGTTGCAAACCTTTTCCAAAACAGATCATTTTATTAGTAACAAATT
GAAAAACAATTCAACTTTGCACTTTTAGATCCCATGGACAATTTACCTAAATGTGGAGCT
AATTATGTTCCTCTTACTCCTCTCACCTTCTTAACAAGAGCCTCCAATTCTTATGCCAAC
CGCACCTCTATTATTTATGCCAATATACGCTTCAATTGGCGGGAAACCCATGAACGTTGT
TGTCGCCTTGCTTCCTCCCTCCGCTCCTTAGACATTGTCAAGAACGACGTGGTCTCGGTC
CTTGCACCAAATGTACCGGCCATGTTAGAAATGCATTTTGCTGTGCCAATGGCAGGGGCT
GTGCTCAACGCCATCAATACAAGGCTGGACGCTAGAAATGTTGCCCTTATTCTCAAGCAC
TCAGAAGCCAAGATCTTTTTTATCGACTATGAATACATCGACAAAGCTAAAAAGGCCATT
GAAATACTAATGTCCGACTTTCAAATGCCAATGCCTCTCGTTGTTGTCATTGATGACCTT
GATTCCCCTACTGGAATCCGGTTTGGGGAGCTCGAATACGAGCAATTGGTGTTCCAAGGC
AACCCTGAATATGTCCTTGAGAATATTGATGATGAATGGGATCCAATTACTTTGAGCTAT
ACATCAGGTACAACTTCAGAGCCAAAGGGAGTTGTGTACAGCCACAGAGGTGCTTTTTTA
AGCACTTTGAGTTTGATTTTGGGATGGGAGATGGGTACTGAGCCTGTCTACTTATGGTCC
CTCCCTATGTTTCACTGCAATGGTTGGACTTTCACCTGGGGAATAGCTGCAAGGGGTGGG
ACCAATGTTTGTATCCGCAATACAACAGCCCAAGAAATCTACTCCAACATAGCGTTACAT
AAAGTAACGCATATGTGTGCTGCACCTATTGTTCTCAACATAATCCTTGAGGCCAAGCCA
CACGAGCAGCGTCAAATAACGACCCCAGTACAAGTTTTGGTGGGGGGTGCACCCCCACCA
GCACCACTGCTTGAAAAAATCGAGAGGGTGGGATTCCACGTGGTCCACGCCTATGGGCTC
ACCGAGGCTACTGGACCAGCCCTGGTGTGCGAGTGGCAAGCCAAGTGGAACAAATTACCC
TGGGAAGAACAAGCCAGGTTAAAGGCAAGACAAGGGCTGGGGATACTAACACTTGCTGAT
GTTGATGTGAAGAACTTCAAGAATATCGGAAAGTGTGCCTCGTGATGGGAAAACAACAGG
GGAAATATGCCTGAGGGGAAGCAGTATCATGAAAGGGTACTTAAAGAATGAAAAGGCAAA
TTCCGAAGTATTCAAGAATGGTTGGTTTTCACAGGGGATATGGGAGTGATTCATCCAGAT
GGGTATTTGGAAATCAAAGATAGATGCAAGATGTGATCATATCAGGTGGAGAGAACATTA
GCAGTGTAGAAGTAGAAAGTGCAATAATGAAACATCCATATGTAGTAGAGGCCTCTGTTG
TGGCCATGCCACATCCAAGGTGGGGTGAAAGTCCATGTGCCTTTGTTATATCGAGGAAAG
ACTCAAACTTGAAAGAATCAGACATCATAGCACACTGTAGGAAGAACTTGCCGGGATTCA
TGGTACCAAAGAAGGTTCAATTTGTGGAAGAATTGCCGAAAACAGGAACAGGAAAAGTGC
AGAAGAATCATTTGAGAGCAGTGGCAAAGACATTTGTGGTGTCTGATCAAACAAGCAAAA
GGGAAAAGCCTAGAGCATACAATCAAAATCATGAGCAGATTCTTGTTCTGTCTCGTCTCT
AGAGATTAAAGAAAGACTTAACAACATGTGTTTGAATATTACTACTACTTATTTTATTTT
TTCTCCTTTTGGCTGCAGCTGAGTTGTTTAATTCTAATCACATCTGTAATTTGAGTTTAC
TGTATGCGTTGTCATCGGAGATTTAGTTTTGTAATACTTCAAGAATTTGTTTATAATTTC
ATGTTAAGTTTCAAGAAGATGATTAGTATTTCTCGGTATAACTTGTGTAATCACAATCTA
TCACTAGTTACCAATCCTCAACCCATGGGTCAATATTTGAC
