Microarray Probes on PGSC0003DMT400042691
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_43206_PI426222305 |
JHI_St_60k_v1 |
GCAGCTTCTTGTTTGTTGAGTTAAGGTCCACAATTTTTTGTACATGGTAGCTCAAAAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042691
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042691 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G29510.1 |
+1 |
5e-40 |
136 |
79/147 (54%) |
SAUR-like auxin-responsive protein family | chr1:10322683-10323114 FORWARD LENGTH=143 |
Transcript Sequence (632 bp)
>PGSC0003DMT400042691 632 pgsc_dm_v3.4
TTTAGCCATCAAATTTCTCTAAATTTCTCATTCAATTTCTTGTTTCCAGTCTTCAAAGGA
AAAATGGCAATGCTCAGCGCTAAGAAACTCATCAAGATGGCCAGGAAATGGCAGAAGTTT
GCAGCCATGCAGAGGAAGAGGATTTCATTTCCAAGAAATGGTAGTGATGCAGACAGTTGC
AGTACATCTTCATCTTCTATGGTTGAGAAAGGCCATTTTGTAGTATATACAACTGATCAA
GCCCGTTTTGTCGTTCCCTTGGCTTACCTTGAAAATGAGATCATAAGGCAACTTTTAAGC
ATGTCCGAAGAAGAGTTTGGGTTGCCGAGTGGTGGCCCTATTAAATTACCCTGTGATTCA
TCCTTCATGAGCTACATCATTTCACTAATCAAGAAAGGTGTAGCTGCGGGAGATCTTCAC
AAAGCAGTGCTCCTCTCGATTCCTTCATGCTGCTGTGCAACTTCTTCTATGCACCAAGAA
ATTGGAAGCCAGCAGCTTCTTGTTTGTTGAGTTAAGGTCCACAATTTTTTGTACATGGTA
GCTCAAAAATAGGTTTTAGAAAGGCGGACATTGAAGAGTACACAATTGTAAAGAACATCA
TACAAATTGAATACTACTTTATTTGAAAATTT
