Microarray Probes on PGSC0003DMT400042079
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22086_PI426222305 |
JHI_St_60k_v1 |
ATTTACTGCATACATTCACAGACTTCACTCTGTGTGATTACATTGGATATGTCTCGTTGT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042079
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042079 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G04280.1 |
+1 |
1e-151 |
447 |
263/417 (63%) |
P-loop containing nucleoside triphosphate hydrolases superfamily protein | chr1:1143643-1146541 REVERSE LENGTH=534 |
Transcript Sequence (1432 bp)
>PGSC0003DMT400042079 1432 pgsc_dm_v3.4
ATCGACTGGATTGTTTTGAATTTCAGGAAGCAGAGATTTGAGAAGATAACAAAAGATTTG
AAAGTGACTAGGGTATTTTCTACGCTGGTAGAGGAGATGAAGGCGATTGGAACGGTATCA
TCTAACGACGGTAATGGTGAGTCCAGATGTACGGACGTGATGGTGCCGGTGGCTCACAGT
CAAAGAAGTCCGGTGCTCCTCCTTATGGGTGGTGGAATGGGAGCTGGCAAAAGTACTGTC
CTTAAAGACATCCTCAAACAGCCATTCTGGTCGGAAGCAGCTGCAAATGCAGTGGTAGTA
GAGGCAGATGCTTTCAAGGAGACAGACGTAATATACAGAGCCCTTAGCTCAAGAGGTCAT
CATAATGACATGCTTCAAACTGCTGAATTGGTACATCAAAATTCAACAGATGCAGCATCT
TCTCTGCTAGTCACAGCTCTTAACGAGGGGCGCGATGTTATAATGGATGGAACCTTATCA
TGGGAGCCATTTGTTGAGCAGACCATAGCCATGGCAAGAAATGTACACAAACATCGATAT
CGAATGGGGGAAGGTTACAAGGTTGCAGAGGATGGCACAGTTACTGAAAATTATTGGGAA
CAAATTGAACAGGAAAAAGGAGAAGAGTCAGCTAATAAGATCAGTAAACCTTATAGAATA
GAATTGGTGGGAGTTGTATGTGATCCTTACCTAGCTGTTGTTAGAGGCATCAGGTACGAA
TAACATTGCTAAGTAATTTTCTAAAACTTTTAAAAATGTTAAATTATTTGGAACTGAGAC
GTGGTATGCAGGCGAGCTATAGCAACAGGGAGGGCAGTTAGAGTAAAGCCCCAATTGAAA
TCTCACAAGAGATTCGCAAATGCATTTCCCAAATACTGTGAACTTGTTGATAACGCCAGG
CTATACTGCACCAATGCCTTAGGCTCAAAACCACCGGTAACATTCTTATCTCAATCGTAT
TTACTGCATACATTCACAGACTTCACTCTGTGTGATTACATTGGATATGTCTCGTTGTTG
CAGTTAATAGCATGGAAAGATGGAGAGAACAAAATGTTGGTGGAACCAGAGGACATCAAG
TGTTTGGAAATGGTGAAAAAACTGAAGGAAGAAGCAGAATCAATTTACGAGCTGTACGAG
GGAGATGATGTATTGTCTCTGCAGACTCCTGGTTCAGTCTGGAAAGACATGGTTTTAATA
CCTACAAGGTCTACTCTCCAACAAGAGCTCAAAACTGCAATTCTAAAAATTGAAAACAGG
GGAAAATAGGTGTTTGCTTCAATCCCCAAAAATATGAATTCAGCAATAACTTCTTATGTA
ATTCTTGCTCAAAGTTCAAACGTTTGTACAATCATTTATTTTTTATTAGTAATGACGCTT
GCGTGAACTTTATTTGAAATGATCCAAGCCACCGATGTTTCTCATGTTCACG
