Microarray Probes on PGSC0003DMT400042060
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22018_PI426222305 |
JHI_St_60k_v1 |
AATTGAAAAAGAACCTTGGAGCTTGGTGGCTTTGGTGAGATTATGGCCAGCCATGCAAGA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400042060
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400042060 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G32010.1 |
+2 |
0.0 |
756 |
418/604 (69%) |
CVP2 like 1 | chr2:13625344-13628081 FORWARD LENGTH=594 |
Transcript Sequence (2644 bp)
>PGSC0003DMT400042060 2644 pgsc_dm_v3.4
CTCTTATATATAATGAATGAATGAATGTAATGTGTATATTTACTGATTTTTCCAAAAAAT
AAAGAATATTGCCTATAAAGTTGCTATCTTTTTATGTTATTTGGTTTCATTTACGGATCA
GAAATTGAGTAGCTAGAAGTAGAAGAAGAAGCTGAAGGTTTTCAAGATTTTGATTTTATT
GGGGTGACTCTGAATATAATTCAGAATTTGAAAGAAGAGTGATGCAATGAGGGATGAGTA
TTCAAAGAAAAGCAAGCTATCTTGGTCCAGAAAATTGGTTAGGAAATGGTTCAATTTAAA
GGGCAAAACTGTTGAATTTGAATCTGATGAATCTGTTTATGGAGGAAGTTATGAGTGGAG
AACAAGCATCTCGGAGTGGGAACATTGCGCTGTCAAGAAGACCAAAACAGAGAAATCAAC
CAGGGGTATGGAGCATCTCCCACGGGGGAGTGTTAGTCTTGATCGCCCTAAGATCATAAA
TGTACAAGATTATAGACTCTTTGTGTCTACATGGAATGTCGGTGGAGAATCGCCACTGAG
CAATTTGAATCTAGATGAATGGCTTCATTCCTCACCCCCTGCAGATATTTATGTGCTTGG
ATTTCAGGAAATTGTTCCTTTAAATGCTGGTAATATACTGGGAGCCGAAGACAGTGGCCC
TGCCAAAAAGTGGATCGCTCTGATCGGGGAGACATTAAACAACGGTCCTGGTACTAGTGG
AGGTAATGGTTGCTACACTTCTTCTCCTGTTCCAATTGCCGAGTGGAATGCTGACTTTGA
GGGGTCAAATAGATACAAGGCATCGTCCTTCTCTCATCGTCGGTCAGTTCAGACACCTCA
GTGCGGGAGCGTGGAAAATGATCCATCAATCTCGCAACTTCGTGTGGATGGACGATACAG
TGTTTGTGATCGAGTAATTTTTGGACATAGGTCTAGTGATTTTGATCCTAATAGGGAGCA
GAGGCCAAGTGACTTTTCATCTTCTCGCAGACCAAGTGACTATACCTCTATTCACAGGCC
AAGTGATTATTCATCTGGTCATAGGCCTAGTGACTATTCCTGCGGACAAAGACCAAGTGA
TGTCTCCAGATGGGGCTCATCAGATGATGAATATGGACCTGGAGATTCACCTACTGCTTC
GTTTTCCCCTTTGAGGAATGGAGGGTATGCTCCTGCAGAAGATGGTTATAGAATGCCCAG
AAATTCAAACTACTGTTTGGCAGCAAGTAAACAAATGGTTGGCATTTTTCTCACCGTATG
GGTGCGGAGTGATTTGAGGGAACATGTTCGGAATATGAAAGTATCATGTGTCGGCAGAGG
GTTGATGGGGTACCTTAGGAATAAGGGATCTATTTCAATCAGTATGCAGTTACATCAAAC
AAGTTTTTGCTTTGTCTGCACTCACTTAACCTCTGGTCAGAAAGAGGGTGATGAGTTGCG
CAGAAATTCTGATGTCATGGAGATCCTAAAGAAGACAAGATTTCCGCAAGTTAGTGGTGT
GGATGAAGAGAAGTCACCAGAAACTATTCTTGAGCACGACCGGGTTATTTGGCTTGGGGA
TCTGAACTATCGAATTGCACTCTCTTATCGTTCTGCAAAAGCACTTGTTGAGATGCAAAA
CTGGAGAGGATTGTTGGGAAATGATCAGCTGAGGTTAGAACAGAGACGTGGTCGAGTTTT
TGAGGGATGGAAAGAAGGAAAGATATATTTCCCACCAACATATAAATATTCTAGGAATTC
AGATAGGTATTCTGTTGATGACATGCAACCAAAGGACAAGCGTAGAACACCTGCATGGTG
TGATCGTATTTTGTGGCATGGTGGGGGTCTCCAACAGTTGTCTTATGTCCGTGGGGAGTC
TAGATTTTCAGATCATAGACCTGTTTTCAGTGTGTTTTTGGCCGAGGTTGAATCAGAACA
CAGTAGATTGAGGAAAATGAGACGTTCAAGCTCAAGAATTGAGGTGGAGGAGCTCTTGCC
CTACTCACATGGTTATACCGAGCTCTGCTTCTTTTGAAGTAGAAGTGAGGACATAAAGCC
TCAGTGTCTGGTGTGCTCCCCTTTTTTGTCTAGATTCAGGCAGGCATTGCTTTGGAAAAA
CTCAACCGCAAAGGGGGACTGGGGACCATCCATATCCCACAAATTGAAAAAGAACCTTGG
AGCTTGGTGGCTTTGGTGAGATTATGGCCAGCCATGCAAGAGAGCACGGTGTGTCAGCAC
ACTTGATGTCTGAGCTGTGGTTACGAGTCTGCTTTTGCTATCTGAGTTATGGAAGGATCC
TTTAATCAAGTTCTTGTAGGTCCTTGAGAAGGTGAAGTTTACTAGAGTCTACAGAACAAA
CTGTCTTTGGGACTCTTTTCCCCTTGAGCATTGGAAGTACTGCTCCGGAAGCTGAAGCTA
ATGCCCCGCCACATACTAATTAGGTGCTTCTTGTTTGGTCAATTTTTAACAAGATGAACT
CGAGCTACGGTTAAATAGGACTACCAAGTGAGAAAATGATAGTTCTATTTCAAGATTCTT
TTATTATGATTTAGACAGAGGATTCAATGGCATAAAGAGAATGAGACATGGTGGAAAGTT
ATCATGTTTGATCATCTGGTGTGCACAAACTTAAGAGGAACACACACACACACACACACA
CATA
