Microarray Probes on PGSC0003DMT400041822
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26121_PI426222305 |
JHI_St_60k_v1 |
CGAAGATGTAAATGTGATTTCTGTGTTCATCAGATTATATGTACTCCGCGGAATCATATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400041822
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400041822 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G08980.1 |
+1 |
1e-95 |
296 |
175/326 (54%) |
F-BOX WITH WD-40 2 | chr4:5758993-5760108 FORWARD LENGTH=317 |
Transcript Sequence (1530 bp)
>PGSC0003DMT400041822 1530 pgsc_dm_v3.4
ATAAATTTATTATTTCTGTCTGAGTAATCAAAATCTTGTTTCCTTTTTGTTTCTCTTCTT
GTTTCTTTCTTACATACTTTAGCTTCTCTCTTTTCTTTCTCTCAAAAACTTGCAACCCCA
CAAAAGCTAAAAAGGGTACTGAGGTACTGAACTGAAGCTCCTCATATTACCCTTCATTTC
AGGCGGATAAACCGGTGGTTTTTTCACAGATCCAAACTTTAGCTAATCTTTTTTGAGGGT
GTTGGTTAGTTTTGAGTGATGCTGATCTGTGTAGCCATTTGAATCTGTAGATTGTTTGCT
GGTGGCAATATGGTTGTGTAAAGGAGAGAATCAAGAATTGAAATGGAGGAAGGATTCGAG
TTTAGGCCGTGGGATGAATTGTTACCCGATGCACTTGGGCTAATATTTAGAAACCTTTCT
CTTCAAGAGGTGCTAACTGTAGTTCCAAGGGTTTGCAAGTCATGGGGAAAAGCAGTAAAG
GGACCTTATTGTTGGCAAGAGATTGACATTGAGGAATGGAGCAAAAATCGCTGCCCTGAA
AACCTTGATCGGATGCTTCGCTTGCTTATTCCAAGAAGCTGTGGTTCCCTTCGTAAACTC
TGTGTCTCTGGTCTCTCGGACAAATCGAGCTTTGAATTCATTGCAAACAATGCCAAATCT
CTGCAGACATTGCGGTTGCCAAAGTGTGAATTAAGCGACTCCGTAGTGGAACAGGTTGCA
GGAACATTTTCCAACATTACGTTTTTGGATGTAAGCTACTGCATAAAAATAGGTGCAAGA
GCCCTGGAAGCCATTGGGAAGCACTGTAAATGTCTGACTGGTTTGCGCCGAACTATGCAC
CCACTCGAGGTTATCGACAAGCTCTCACAAGATGATGAAGCCCTTGCAATTGCTACATCG
ATGCCTAAGCTCAAACAACTGGAAATTGCTTACATGCTGGTTGGCACATTGAGCATATCA
GAGGTTCTTCAAAACTGCAGGCAGCTCGAGCTGTTAGACGTAAGGGGTTGTTGGAATGTG
AACCTTGATGAGAACTTTGTCAAGAAATTCAATAAGCTAAAGGTTGTCGGACCCCTTGTC
GTGGATTACTATGATAAGAATGGCTGGGACAACTGCTCGGACTATTCAGGTTCTTCTGGT
TATATACCATGGGACTTCGTGGCTGGTGACATTGATGATGACTTTGACGATGATGAGATG
TCTGATGGCTACTGGGAAGACGAGGAACATGTGGAGGATGTGGAAATGTGGTTTTACGAT
GACTTAAATGCAGTGGATGCTGGATATGATTGGCCCCAATCTCCTTGAGGTTTGATGAAC
TAAGTTCTGATTCAATTTCCAGAAGCTTTTCATATACTATATCTTGTATCTGCTAATGAC
TCTGCCTATACTACTATCTAAATGAAAGTTTGCTTGCTTTCGAAGATGTAAATGTGATTT
CTGTGTTCATCAGATTATATGTACTCCGCGGAATCATATAATAAAAAGTTGTCATTGTAT
CAATTGATTGAGTTCAACTATATACTTTTC
