Microarray Probes on PGSC0003DMT400041636
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26133_PI426222305 |
JHI_St_60k_v1 |
TGGAGTGCCCTTAGAAGAAGGAACCTTTCCTCTCCTAGTTGTTTCATAGTCGTTTTGCTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400041636
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400041636 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G65430.3 |
+3 |
1e-18 |
85 |
44/50 (88%) |
general regulatory factor 8 | chr5:26148630-26150255 REVERSE LENGTH=260 |
Transcript Sequence (1148 bp)
>PGSC0003DMT400041636 1148 pgsc_dm_v3.4
CCAAAAATGAAAGCACATTTTTGGGTGTTTGTTCAAGTAGTTTGAAAATTTCATGCACAA
ATTTGTGGCAACTATTAAGGCTTTGTGAATTTAATGTATAGATCTTTGACCATGTGGTTG
TGGTAAAGGAGTACTACATCAACAATGAATGCCACACATTCATTGTTTTGCTTAAAGCAC
CATAATATAGGTTACTAGTATAGGTAGAATCAACCAGTTTCTCCAATCCCGTGAGTCAGA
GACTTGAGGCTCATAAACCTTTTTAGTGTTTCCAGCAACTGCCTAAAAAAGATAGATGTT
GGTTCTACATAGACAATTTCTTTTACAGTTCGGCAAGAGGTTCCACTTCATTCATTTTTA
GTTCTTTTGCATATAAATATAAAAATGACTACCAGATTTGATTTTAGGAGTCGTCTCGAC
TCTTGAGGCTGATTCGTGATTCATTGATTGCTTTGTTACAGGCATTTGAGGAAGCTATTG
CTGAACTGGACACTTTGGGTGAGGAATCCTACAAGGATAGCACACTTATCATGCAGTTGT
TAAGGGACAATCTCACTCTCTGGACTTCTGATATGCAGGTACTTCATTTTTTTCATTAGC
AAAATCCCTTACATTAATGCATGATATGTTATATATTTACCCCTTCTGGGCCGGTTATGG
ACGAGGAGTGATTCAAACCCTGACACCATGGTTCATTGCCACGGGCTCTACGCCTCTTAG
CTACAAACCTCACCTCATTTCCCCTGGAGTGCCCTTAGAAGAAGGAACCTTTCCTCTCCT
AGTTGTTTCATAGTCGTTTTGCTTATAACGTTAGTATGATTTGGTTAATGCAGGAGCAGA
TGGACGAGGCGTGACATGATACCGCTCCTCCAGGAGGGTGAGCTCAAATGTCACAACAAC
AGTCTGTAAAATCTACCTATGCAATTGATAGCTTTTGTAATTTTTATATGCCCTGCTTAC
TTTGATGATTTTCTTGTTCAAACTTCCGTTTGATACTTTTTATGATTTTAATTTTATTTC
TCTAGCTTCCCTTTTAGTTCTCTCTTATGTCTTGGAGTATCTCCAAGTCTGAAACCCTTT
TAATTTATGCGTCTTTAGTTTGACTGAACATGAAGTTTAAGAAAGTAAAACAAAACTTTC
GAATCTTG
