Microarray Probes on PGSC0003DMT400040971
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46523_PI426222305 |
JHI_St_60k_v1 |
AGGCAGACTTTGATGTTTGGGTAAAGATTATGAGGTTCACCAGCTCAGATAAACTTCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040971
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400040971 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G20150.1 |
+2 |
2e-88 |
271 |
143/269 (53%) |
SPX domain gene 1 | chr5:6802429-6803367 FORWARD LENGTH=256 |
Transcript Sequence (1203 bp)
>PGSC0003DMT400040971 1203 pgsc_dm_v3.4
TTTTGCAATCTTATAAGTATATACTCCTATTGAAAGAAAGAAAAAACTCTGTATTGTATT
GTATTGTGTGGAGATGAAGTTTTGGAAAATATTGAAGAGTCACATAGAGGAAACATTGCC
TGAATGGCAAGACAAATTCTTGTGTTACAAAGATCTGAAGAAAGAATTGAAATTGATTTA
TCCTCAGGATGCTAGACCTATGAAAAGGCAGAGGTTGAATAATGATGAGGTTACCAAGGA
GGTGAATGATTTTGTGAAGCTGTTAGAAGAGGAGATTGATAAGTTTAACAGTTTCTTTGT
CGAGAAAGAAGAGGACTACATCATTCACCTTAAGGTATTGAAAGAAAGGGTAGCTGAGAT
GAGAAAGTCAAATGTAGAGGTGAATAGATTAGGTAGGGACATTGTCGATCTTCATGGAGA
AATGGTTTTATTGGAGAATTACAGTGCTCTTAACTATACAGGAGTTGTGAAGATTTTAAA
GAAATATGACAAACTCAGTGGGGAGCTTCTTCGATTGCCTTTTATCCAAAAGGTGCTCGC
AGAGCCATTCTTCGAAACTGAGGTTCTAAATAAACTAGTGAAGGAGTGTGATACACTTCT
TAGCCTTTTATACCAAACTGAGCCACTCAAAGTAGCAGGAGCAGGGGGAGGAGGTAGTGG
CGGAGAAAGGCCAGTCAAAGTTCCTCAAGACCTTGCAGAGATAAAGAATATGGAGAACAT
GTACTTGAGACTTACCTATTCAGCACTCAGAGTCTTGCAGGAGATGCGTAGCAGAAGTTC
AACTGTCAGCATGTTCTCTTTGCCACCAATGAACACCAACGCGCTCGACAATGTATGGAA
AAATGCTCCAGTGGTCATACAAGAAGCAAAGTAGGGGTTACTCATGTCTCTTGATATACT
CTTTTTTTTCCCCTTTTTGCCAAGAAGAAGCAGTGAGTGCAGTTGCTGCGACTACATTAC
CTTACAGCTCATATATAGCTTCAGATTTCTGATGCATCATGTAACTGATAAATATATATA
TATATATATACACGTTCCAATTTGTAGTCCATTGTTTTTGGCTCAAGGAATTTTTAAGTT
GAGCTAATGCTGATATAGTTTTAAAGGTTGTGGACTGTATGTATGTATGTACATTAGTAT
TGGAGGCAGACTTTGATGTTTGGGTAAAGATTATGAGGTTCACCAGCTCAGATAAACTTC
TTG
