Microarray Probes on PGSC0003DMT400040970
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46518_PI426222305 |
JHI_St_60k_v1 |
AGGCAGACTTTGATGTTTGGGTAAAGATTATGAGGTTCACCAGCTCAGATAAACTTCTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040970
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400040970 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G26660.1 |
+2 |
3e-43 |
157 |
82/140 (59%) |
SPX domain gene 2 | chr2:11338932-11340703 FORWARD LENGTH=287 |
Transcript Sequence (1607 bp)
>PGSC0003DMT400040970 1607 pgsc_dm_v3.4
TTTTGCAATCTTATAAGTATATACTCCTATTGAAAGAAAGAAAAAACTCTGTATTGTATT
GTATTGTGTGGAGATGAAGTTTTGGAAAATATTGAAGAGTCACATAGAGGAAACATTGCC
TGAATGGCAAGACAAATTCTTGTGTTACAAAGATCTGAAGAAAGAATTGAAATTGATTTA
TCCTCAGGATGCTAGACCTATGAAAAGGCAGAGGTTGAATAATGATGAGGTTACCAAGGA
GGTGAATGATTTTGTGAAGCTGTTAGAAGAGGAGATTGATAAGTTTAACAGTTTCTTTGT
CGAGAAAGAAGAGGACTACATCATTCACCTTAAGGTATTGAAAGAAAGGGTAGCTGAGAT
GAGAAAGTCAAATGTAGAGGTGAATAGATTAGGTAGGGACATTGTCGATCTTCATGGAGA
AATGGTTTTATTGGAGAATTACAGTGCTCTTAACTATACAGGTGGGAATCCCTTCTCTTC
AATTGAGTTCTATCAGCAACCTCAACTTAATTCATAGCCAGATTAATCAACTGAAACATG
TGGGGCAGTGGATGCATTGTTCCTCCCTTAATTACATGTATAGGGTTAGATCTGAGGGTA
TAGAAAATTCATTCTTAATAGGAATGGGGTGCGAATCCAAATTGGTGGCAACCCCCAAAA
ACGAAGTAATGGATTTTCAATGCTAAATTTTACAACATAATTGCATATAGACATCTGATC
AGTCACCTCTTTGTGGCATATGTACAAGTATGGATGTCTTTTCCTCTTCACGTTTGTCCT
GTCCTCCACTACCTGCTGATATCATTCGTATAGCTTTTCCCATATGGCTGTAATGAATTT
ATATTTTTGCTTTTGCTCTTCACAGGAGTTGTGAAGATTTTAAAGAAATATGACAAACTC
AGTGGGGAGCTTCTTCGATTGCCTTTTATCCAAAAGGTGCTCGCAGAGCCATTCTTCGAA
ACTGAGGTTCTAAATAAACTAGTGAAGGAGTGTGATACACTTCTTAGCCTTTTATACCAA
ACTGAGCCACTCAAAGTAGCAGGAGCAGGGGGAGGAGGTAGTGGCGGAGAAAGGCCAGTC
AAAGTTCCTCAAGACCTTGCAGAGATAAAGAATATGGAGAACATGTACTTGAGACTTACC
TATTCAGCACTCAGAGTCTTGCAGGAGATGCGTAGCAGAAGTTCAACTGTCAGCATGTTC
TCTTTGCCACCAATGAACACCAACGCGCTCGACAATGTATGGAAAAATGCTCCAGTGGTC
ATACAAGAAGCAAAGTAGGGGTTACTCATGTCTCTTGATATACTCTTTTTTTTCCCCTTT
TTGCCAAGAAGAAGCAGTGAGTGCAGTTGCTGCGACTACATTACCTTACAGCTCATATAT
AGCTTCAGATTTCTGATGCATCATGTAACTGATAAATATATATATATATATATACACGTT
CCAATTTGTAGTCCATTGTTTTTGGCTCAAGGAATTTTTAAGTTGAGCTAATGCTGATAT
AGTTTTAAAGGTTGTGGACTGTATGTATGTATGTACATTAGTATTGGAGGCAGACTTTGA
TGTTTGGGTAAAGATTATGAGGTTCACCAGCTCAGATAAACTTCTTG
