Microarray Probes on PGSC0003DMT400040920
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_27235_PI426222305 |
JHI_St_60k_v1 |
TGATCACCTGTCATGTTTTCATTTCAGGAAGAAGCAGAATCGGAGTAAAGATTGGCATAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040920
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400040920 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G18390.2 |
+3 |
3e-149 |
458 |
247/404 (61%) |
Protein kinase superfamily protein | chr1:6327463-6329935 FORWARD LENGTH=654 |
Transcript Sequence (2608 bp)
>PGSC0003DMT400040920 2608 pgsc_dm_v3.4
TTCCTCTATATACAAATTATCCCTTTGTCTTTTCTTCTTGTTTTAAACATCATATGAATC
TTCAAAGCCTATTCATGGTAAAGAAATCTGTTTCTGTTCTTGTAGTCGCGATTCTTTTCT
TCACCTTAACAGATGACACTCTTTCTATTTACCTCAATTCTAGTGCTTGCGTTACACAGA
ATTGTGGTGATGGAGTGAACATATCATACCCTTTTTGGATTCCTGAGAAACAGCCATCCT
ACTGTGGCTTACCAGCTTATAATGTCACTTGCAACAAACATAAGCCATTTGTTCATATTT
CTGAAGAGGAGTTTATCATTAAGGAAGTATATTACACAAACTACTCGATTCTGCTAGCGA
AAGCAGACGTGTTTGATGAAGAAAACAAATGTCCAGTACCAAGACATAATTTTAGCACAA
GGGGTACTTCATTTTCTTTGGGACTTAACACTGCAGATCTCTTTTTCTTCTATGACTGCA
CTCTACCTTATGAAAGGGAGACATATGATGTCAATTGTGCCCGTAATGCCACTCACCATT
CTTTCGCGGTTTTTCATACTGAGCTTCTGGAGCACTATAACTATTCAGTCGAATCGTGTC
AGGATCCTGTTTATGCCCTTGTTGAGACTGATTCCATAGATAGATTGCTAAAAATGAATT
ACACACAAGTATTACAAAAGGGATTCTTTCTGCAGTGGGATGGGAGTAATTGTAGAGATT
GTCGGAATAGTGGAGGGCGTTGTGGTGCTCAAAGTAATGATTTTTTGTGCATTTGCAAAG
ACCAAACCCAACCAAGAACATGCTTTCATGGTAAATTTAGAAACTATTATAAGTTTAAAT
CCATGTTTGACATTGAGTAGAGAATATCTCCTTAATTCCTAGATAAAAAAGGTAAACCAT
TCTGTTATTTATTGATCATGTTAAGGGAATAACGTTTCCGATTGAGGTGATACTGATAGC
AGCTAATTAGTTATGCTTTACTGTGATACATTACAATTGTTCGGTATCAGTTGATCACCT
GTCATGTTTTCATTTCAGGAAGAAGCAGAATCGGAGTAAAGATTGGCATAGGTTTTGGTA
CGGCTGCATTTACCGCTTTGATGGCAGGTGTAATTTTCCTTATCCATCGTCGTAGACAGA
ACAGAAAAAGTTATGCTGGTTCGTCATTGATCACCAGAAACATTCTTTCCTATCCTTCCT
CCATGAAGGATCCTGAAAAGGCTAATATAGCTATGGGAGTTCACCTCTTTGACTACAATG
AACTGGAGGAAGCCACTAACAATTTTGATTCCAAGAAAGAGCTTGGAGATGGTGGATATG
GCACAGTATATAAAGGTAAACTTCGTGATGGACGTGTCGTTGCTGTTAAACGTTTGTATG
AAAACAACTGCAAGAGAGTAGAGCAATTCATGAATGAAATTGATATCCTAACACGGTTGC
ATCATCCAAACCTTGTCACTCTTTACGGATGCACATCTCGCCATTCCAGTGAGCTTCTAC
TTGTTTATGAATACATTCCAAATGGCACAGTTGCTGATCATCTACACGGTGGAGATTCAC
GGCGTGGATCGCCTTCATGGAATACACGAATGAAAATTGCCATAGAAACAGCAAACGCAC
TTGCCTATCTCCATGCTTCAGACGTCATCCACCGTGATGTAAAAACTAATAATATCCTTC
TGGACAATAATTTCTGTGTTAAAGTAGCAGATTTTGGCTTGTCTCGGCTTTTCCCAACGC
ATCTTACTCATGTCTCAACAGCTCCACAGGGTACTCCTGGATATGTTGATCCTGAGTACC
ACGAGTGCTATCAGCTCACTGACAAAAGTGATGTTTATAGTTTCGGAGTGGTATTAGTTG
AGCTTATATCATCACTGCCTGCTGTTGATATCTGTAGGCACCGACATGAAATTAATTTGT
CAAATATGGCCATCAACAAGATTCAGAGCAATTTATTACATGAGTTGGTGGATTCAAATA
TCGGGTTTGACACTGATGATAATATAAGGTCAATGATAACTGCAATGGCAGAGTTAGCAT
TCCAATGTCTACAGAACGACGGGGATATGAGGCCATCTATGCAGGAAGTTGTGGAGGCTC
TACTGAGAATTCAGAGAATGAATAAAACTGGGAAAACAGACAAGGGTCATCCTGATGACG
ATGATGCAGGCTTGTCGAAGAATAACACATCATTAGTTTCACCTGATTCGGTTACTGCAA
AATGGAGTAGTAGTTTAACAACACCCAATGGTAGTACCTAGCATTTGGTTCTCTAAGGTG
GTGCACTCAAACGCCTTCCATGTTGGTTTCCAAAACCTGAATTACACACTTTGATTACCT
TGGTTTTCTCTGTTAAAGAGGATGTACATATGTCAGTGCAACACGTTTAATGATTCAATT
TGAACTTCTCAAGTCTTCTTTTATCTTTTCGATCTTCTCAAGTGATCTGCTGATTTATTT
TTGTAGCAGTACATGTTTAATTTAGTGCGTAGCAATGGAAGAATAGGATTAGTTTCAAGA
GAACATTATCCGTATAGTGTAGTATGACAACTGACTGATTTCGAATGTAACATAGAAGTT
CAGTGCTCTTAAGCAAGAAAGATTGTAC
