Microarray Probes on PGSC0003DMT400040576
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46042_PI426222305 |
JHI_St_60k_v1 |
GTGAACCCCTACTGGAGAAATGTTTGGTTTTATTATGTTGAGTATTACATGTATTCTTGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040576
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400040576 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G74170.1 |
+1 |
3e-141 |
461 |
329/890 (37%) |
receptor like protein 13 | chr1:27891555-27895441 REVERSE LENGTH=1000 |
Transcript Sequence (4164 bp)
>PGSC0003DMT400040576 4164 pgsc_dm_v3.4
ATGGATGGAGATGTTGTTATTGTTGTTGGAAAGAAGAAAGGACTATGTTCCATTGATCAT
AAGTGTTTCAAGAAACCTGGACAACTAGAAATACTTGATTTGTCATTGAACTACTTGAAC
CGCAGCATCTTTAAGTCTCTTAGTCAACTTTCATCTCTCAAGTCGTTGTACCTCGCGGAA
AACAACATTGAATCAGGTTCTGAGAGATTATCAGGGTTGGACAAGCTGGAAATCCTGGAT
TTGAGCTACAATGCACTAAATGATGAAAATGTTCTCTCTGTTCTAGATCTAAATGTATCT
AGAATGACGTTGAAGAAGCTTGATATAAGGTACAACAGATTCCGGAGTTTTATACCAAAT
GAAGAGTTGGGAGCTTTAAGAAATATCGAGTGGTTACCGTTGGATGGAAACACATTGGAT
GAGAACTTTCTCAGGAGTACTGGTGTAATGTCATCTCTTACAGTGTTATCAGTAGCTAAC
TGCAACCTCAGTGGAGTCCTACCTCTTCAAGGCTTGTGTGATCTAAAATATCTTGAAGAA
CTAAGTCTCCGCCTAAACTACTTCATTGGAGAAGTCCCTGCATGTCTTGGAAACTTAACA
CCTCTTCGGTATCAACATCATTTACGGATTCTTTGTCTCTCGAAATGTAACATTGGTGGA
AACTTCCCAAATTGGTTGTTAGAAAACAATCCCAGACTAGGAGAAGTTTATTTGGATGGA
AATGCATTCAATGGATCTCTTGAATTTCTGTTCCTTCCTAATCTGAAAGCTTTTGATATC
TCCAGCAACAAAATTCAAGGACAACTTCCTCCTAACATTGGGTCCATTTATCCGAAACTC
ATGATATTCAAAATGTCCAACAATATGCTTGAAGGCTTGTTGCCTTCAAGTTTTGGTGGC
ATGAAAGACCTTCAATGCTTGGATTTGTCAGGCAATAAGCTAACAGGTGATCTACCTATT
GGATTGGCTCGTAAAGGATCCAAGTTAAATTTTCTGAGATTATCGAATAACATGTTGAAA
GGGGAAATATTTCCAGTTTTGACTAACATCAACAATTTTGCATATTTGTTCTTGGATGGA
AATAACTTCTCAGGCCCAATTCCGCAGGCGTTATCCACTGCCTTATTATTTTCACTGGAT
TTAAGTTACAATAATTTGTCAGGAAACTTACCAGTGTGGCTTGGTGACATATCCTCCTTA
GATTCCCTCGCACTGTCCGGAAACCATCTAAGAGGTCATATTCCGCCTGATTTTTGTAGA
CTTGAAGGACTTCAGGTGTTAGATCTCTCTGAAAACAACCTTGTTGGCACGATTCCATCA
TGTTTTAGTGCTTTACGAGCCTTAAGACGTGTGTATTTGAGCAAAAACATGTTACAAGGG
GAATTTAACGTGTTCTCGAATTCCCATCTACTAATGTTGGATCTTGGAGATAACAACTTC
AGTGGTTCAATTCCAAAATGGTTGGACGAAACTTCTGAGTTAACTGCCTTACTCTTGAAA
GGAAATCGTCTTCAAGGCACCATTCCTCCACAGTTATGTTTCGAGAAACTGAGACGACTG
AGGAAACTAGAAAGACTTGACTTGTCGGGGAATCAGTTCAATCGCAGCATCTTTCAGTCC
CTTAGTCAGCTTTCATCTCTCAAGTCACTGAACCTCTCAAGTAACAACAAAATTGGATCA
GGTTCTGAGAGATTGTCAGGGTTAGACAAGCTGGAAATCCTAGATTTGACCTATAACAAT
CTAGAGGATGAAAATGTTCTCTCTGCTCTAGAGTTGAATAAATCTAGAACGACATTGAAG
AAGCTCGATATAAGGTACAACAGATTCCAGAGTTTTATACCAAATGAAGAGTTGGGAGCT
TTAAGAAATATAGAGTACTTATTGTTGGATGGAAACACATTGGATGAGAACTTTCTCAGG
AGCAGTACTGGTGTAATGTCATCTCTTAAAGTATTATCAGTAGCTCAATGTAACCTCAAT
GGAACTCTACCACTTCAAGGCTTGTGTGATCTAAAATATCTTGAAGAACTAAGTCTCAGC
AGCAACAGCTTCACTGGAAAACTCCCTACATGTCTTGGAAACTTAGCGTTTCTTCGAGTA
ATTGATCTCACTCATAATCAGTTTACTGGAAACATTGCTTTATCTCCACTTTCAAGTCTC
TTGTCCCTTGAATACCTCTTGATAGCAAACAACAACTTTGAAGTACCAATTTCATTCGAG
TCATTTGCTAACCATTCAAAACTTAAGTTTGTCATTGCTGACTACAACTCGGTAATTGTA
CAAACTACGTCTAAAAGTTGGATCCCGGAGTTTCAATTAGAAGCCTTATCTTTATTCAAC
TGCTCTCAAATGCCAAACTTTCTTCATTCTCAACATCACTTGAGACTTCTTCGTCTCTCG
AAATGCAACATTGGTGGAGACTTTCCAAATTGGTTATTAGAAAACAATCCTAAACTTGGA
GAAGTTTACTTGGATGGAAATGCATTCACTGGATCTCTTCAATTGCCATTACTTCCTAAT
CTGAAAACTTTCGATATCTCAAACAACAAGATTCGGGGGGAACTTCCTGCTAACATTGGG
TCCATTTTCCCAAATCTCGTGATATCAACAATGTCCAACAATATGCTTGAAGGCTTGTTG
CCTTCAAGTTTTGCTGACATGAAAAACCTTAAATGCTTGGATTTGTCATACAATAAGTTA
AAAGGAGAGCTACCGACAAGATTGGCTCGTAAAGGATCCAAGTTATATTTACTGAGATTG
TCGAATAACATGTTGAAAGGGGAAATATTTCCAGTTTCAGCCAACATCAACAATTTCGAA
TACTTATACTTGGATGGGAACAACTTCTCCGGCCCAATTCCACAGAAGTTATCCACTGCT
CCTTTACGTACATTGGACTTAAGTTACAACAACTTGTCAGGTAACATACCGTCCTGGCTT
GGTAATATCTCCTCCTTAACCTCCCTTGCATTGTCCAAAAACCATCTAAATGGTCATATT
CCACCTGATTTCTGTAGGCTTGAAGGACTTGAGGTGTTAGATATCTCTGAAAACAACCTT
GTTGGTGTGATTCCATCATGTTTTAGTAGTTTCTGGGACTTAAAACATGTGTATTTGAGT
AAAAACAAGCTACAAGGGGAATTCAACATGTTCTCAAACTCAGATTTAAGAGTGTTGGAT
CTCGGAGATAACAACTTCAGTGGTTCCATTCCAAAATGGTTGGGACGTTCTGGTATAACC
ACCTTACTTTTGAAAGGAAATAATCTTCAAGGCACCATTCCCACAGAATTGTGTCATGCT
AGTGACTTAAGAATTATGGATCTTTCTCACAATAATCTCTCGGGACCTATTCCTCGTTGC
TTTGGGAACATAATGCAACAAGAATATGTCATAGAAGACAAATACAGTCCAGCATTTGGA
TATTCAGGATTCCAGACGTTTGGAGGAGACGCTGCGATAGAGGTAGAATTCTCGATCCAG
TATTCATCGACAATCATGTTTCTAGATACCTATGTATGGGTTGGAGCAGAATTTATGACC
AAACACATTACATATTCCTATGAAGGTAGCATGTTTTATTATATGTCCGGAATTGATCTT
TCTTGCAACCAGTTAAGTGGTCACATACCTAAGGAGCTCAGTAATCTTACTCAAATTCGT
GCGTTGAACTTGTCACATAACCACATAACTGGAACAATACTATCAGCATTCTCGAAGCTT
CTGAATATCGAGAGTTTGGACTTGTCATACAACAACTTGACTGGGAATATTCCCACTCAA
CTTCTAGATTTGACAACTCTAGCAGTGTTTAGTGTGGCACACAATAATTTAACAGGTATG
ACTCCACAGCCTATTGCACAGTTTGGAACTTTTAATGAAAGCAGTTATGAAGGAAATCCT
TTTCTTTGTGGTCCTCCACTGCTCATCAGTTGCTCGGAGCCTAAAGAGATACCGAAATCA
CCTCTTGAACCAGAATGTTGTGAAGACGATACTGGTTTTCTAGATATAGAGTCATTCTAT
ATTTCATTTCTTGTGGCATTTGCAAATGTGGTGCTCGTAACGGTTGTAGTCCTCTGGGTG
AACCCCTACTGGAGAAATGTTTGGTTTTATTATGTTGAGTATTACATGTATTCTTGCTAT
TACTTTTTTGCTTCCAAAATGTAA
