Microarray Probes on PGSC0003DMT400040310
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_31010_PI426222305 |
JHI_St_60k_v1 |
ATGACAAGTGCTTTAATTAGAGAGGAACTTGATCGGATGGGAGTTAAATACCGGTGGCCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400040310
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400040310 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G51760.1 |
+2 |
1e-154 |
452 |
224/408 (55%) |
peptidase M20/M25/M40 family protein | chr1:19199562-19201424 FORWARD LENGTH=440 |
Transcript Sequence (1508 bp)
>PGSC0003DMT400040310 1508 pgsc_dm_v3.4
TATAGTCCCATAGTGGGTCGCTTTGAAACCACAAAATAAAAAATACCCACAAATTTTCTT
GATAAATTTTTCACAAATTATGGGTACTAAGAAAGTTTTGGTGTTGTTGGTGTTTTCTAT
GTTCATGTTTTTTTCTTTAGGGCACGAAGAAGAGTGTCTGAATCCATTTTTGATTGATCA
AAATATTTTCGCGAAAGATCATATTATAAATTTAGCGAATGATACTGAGACAGTCAAGTG
GATGAGGAAGATAAGGAGACAAATTCATGAGAATCCAGAGCTTGCTTATGAAGAATTTAT
GACAAGTGCTTTAATTAGAGAGGAACTTGATCGGATGGGAGTTAAATACCGGTGGCCGGT
GGCTAAGACTGGCGTTGTTGCAGCCATCGGCTCCGGTAAGCCGCCGTTTGTTGCTCTTAG
AGCTGATATGGATGCTTTGCCTATTCAGGAATTGTCAAAATGGGAACACAAGAGCAAAAT
TGATGGCAAAATGCATGCTTGTGCTCATGATGCACATACCACAATGCTTCTTGGTGCTGC
TAAAATATTACAACAACTCCAACACAATTTACAGGGTACGGTTGTGTTAATTTTTCAACC
CGCGGAGGAACGAGGGCACGGGGCTAAAGATATGATAGATGAGGGTGTTCTAGAAAATGT
AGAAGCCATATTTGGTATGCATTTAGTACATAAGTATTCAAGTGGTGTAGTTGCATCTAG
GCCTGGTGAATTTTTAGCTGGATGTGGAAGTTTTAAAGCAACAATTAGAGGCAAAGGAGG
ACATGCTGCTATACCACAAGATACTGTTGATCCTATTTTGGCTGCTTCTACTTCTGTTAT
TAGTTTGCAAAGTATTGTGTCAAGAGAGGCTGATCCTCTTGAATCACAGGTTGTTTCTGT
GGCTATGATTCAAGGGGGGTCATCATTTAATGTCATACCAGATTCAGCTACAATTTCTGG
GACTTATAGAGCATTTAGTAAGAAGAGTTTCTATGGTTTGAGGAAAAGAATTGAAGAGAT
CGTACGAGCACAAGCAGCTGTACATAGATGTACGGTGGAGATTGACTTTGATGGTCGTGA
AAATCCAACACTTCCTCCAACTATAAACAATGAGAAAATATATGAACATGCTCGAAAAGT
ATCGAAAATGATCGTTGGAGAGGAAAACTATAAATTATCACCTAGTTTTATGGGAAGTGA
AGATTTTGCTGTGTTTTTAGAGAAGGTCCCTGGATCATTATTCTTATTGGGAACAAAAAA
TGAAAAGATTGGTGCAATTTATCCTCCACATAATCCAAATTTCTTCATTGATGAAGATGT
TCTTCCAATTGGAGCAGCAATTCATGCAACTTTTGCATATACATACCTTTTCAATTCTAC
AAATAAGTGTACTAATTCTCATTCTTCTTATTAGGAATCATGTAAAGCATTCTTTAGTTT
TTTGTTTTTTTTTTTGTATGTTACATCTATATATGATCATTAGTTCCAGTCCAATTTTCT
TTAATTTC
