Microarray Probes on PGSC0003DMT400039786
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36237_PI426222305 |
JHI_St_60k_v1 |
TGATGGTACTTCCGACAAACCATCCTCTGATTCTCGCCATTGAATTAGCTCGACAACACA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039786
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039786 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G15030.1 |
+3 |
8e-73 |
243 |
185/420 (44%) |
TCP family transcription factor 4 | chr3:5062308-5063570 FORWARD LENGTH=420 |
Transcript Sequence (1934 bp)
>PGSC0003DMT400039786 1934 pgsc_dm_v3.4
GTTTTAACTTAAGTACAAATTACAGAAATTCATAGAAAGTCGACATCAAAAATTCTGTTA
AAAAGAAAAACAGAATGGGTTAGGCTATCTATTCTTGTTTTTTCTTGATTTTTTTTTGTT
TTAGCAACACAAAGCTGGAATATAATAAGGTTTTGAGTCTGGATCCTCATAAGAAGAAGA
ATCATTATCAAAATGTAGAAGAAGATGAAGAAGAAAAAGAAAAAAATCAAGAACAAGTTT
TTCAATTTCAACAACCTTTTTCTCATCATGATCATTTTATGTATCAAGATTTAGATAAGA
TCAAACAACAAGCTCAATCCAAGAAACGTTCTTATGTTCCTCCTCTTCCTCGTCCGAAGC
AAAAAGTGGGAACATCGTCAAGATTTGGTGGTGGAGAGATTGTTGAAGTACAAGGTGGTC
ATATCATAAGGTCAATTGGTCGAAAAGACAGACACAGCAAGGTGTGTACAGCTAAAGGTC
CAAGGGACAGGCGTGTGCGTCTTGCTGCTCATACAGCTATTCAATTTTATGATGTACAAG
ATCGACTTGGCTATGACAGGCCAAGTAAAGCTGTGGATTGGCTTATTAAAAAGGCTAAAG
CTTCTATAGATGAGCTAGCTGAATTGCCCCCTTGGAAACCAACCACTGGTGTTACAACCT
TTGATCAAGAAAAAGATGTTGAAGACGATGACAATAATGGTCATTTTGTTGGGACAACTA
GTAAAAGTTCAATGATAATGTTAGGCCAGAATAATAGTGCTAGCTCAAGTGGTGAAAATG
CAAATGGAAGTAATTTTTTGCCTCATTCTTTAGATTCTGATGCCATTTCTGATACTATTA
AGTCTTTTTTCCCAATGGGTGGTGGTTCAACTGAAGGTAATTCTTCAGGTATGCAGTTCC
AGAGTTTCCAAGAACATAACTTGTTGTCAACAACAAGTAGCCAAAGCCAAGATTTGAAGC
TCTCTTTACAGTCTTTTCAAGATCCTGTTTTGCTTCATAACCACCAAATAGAACAATCAC
AAGCTCAGTTTCAAGCATCAAATTTCTTTACTGGAAGCACCCCACTTATCGGATTTGATG
CTTCAGTCTGGCCTCAGCCTCAGACTCAACACCAGCAGCAGCCAGTGGAACTCGGTCGAT
TGGCTGCTGCTCGTGGTGCCGGTGGATACACTGGCATGGCTTTTGGTGGCGGGGCAATTG
CTGGAGCAAATAGTTACTTGTTTAACTCTCAGCCTGCCCCGCCACTACTACAACAATTGT
TCAGCCAAAATCAGTTTTTGTCTCAGAGGGGACCCCTTCAGTCCAGTTACTCACCTTCGA
TTCGTGCATGGATAGATCCATCAGCGATTGCTATTGCCACAGCTGATCCAATTCATCACC
ACCAACACCATGTGTTGCCTATGTATTCAACATCAGTTTCTGGTATTGGATTCGCCTCAG
AAGTAGGCGGATTCTCTGGCTTTCGCATTCCTACACGAATCCAAGGTGAAATAGAGGAGC
ATGATGGTACTTCCGACAAACCATCCTCTGATTCTCGCCATTGAATTAGCTCGACAACAC
ACTCTCCCTTTATCACCTGACAGGAAAAAGTACTATACATCAAGATGGAAATGAGAAAGG
ACAAGTCAGAGAAAGGGCGATAATTCATTTATCAAGTCTGATTCAGTGGCAATGCATTGC
GGAAGAAGAATCCTGAGCATAGTTTCAGGTTTTTTTTAAAGATTAAATCGCGGTGTAGTA
TTCATGTATAAGTGTGATTTTTCTACCTCAACTGCTAATTTAGGATTGCTTATGTAATTC
TGTTGCCAAGTTGTTGTTGTTGTTGTTTGCTTATTATCTTCAGTTCATTAGAACAAGTAA
TTTTCTCTTGAATGTTTCTATTAAATCTTGAATGCCAATTCTTGTCAACCTTACTGCTTT
GGTATGCATTGAAG
