Microarray Probes on PGSC0003DMT400039668
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_36208_PI426222305 |
JHI_St_60k_v1 |
CAGGAAATATATGCAGGGGCATGTATATTCTTTTAGGTACTGGGCTTATAGTTTGTTTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039668
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039668 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G27410.3 |
+1 |
1e-16 |
80 |
48/101 (48%) |
NAC (No Apical Meristem) domain transcriptional regulator superfamily protein | chr4:13707928-13709013 REVERSE LENGTH=314 |
Transcript Sequence (1337 bp)
>PGSC0003DMT400039668 1337 pgsc_dm_v3.4
TAAGCTCTTTGTGTCTCTTCATCAAAGATGTTTTAACTTCGATGAATTGATTTACAGCAA
CAACAATTTGTTTTCACATAAATTGGGAATTATTACTCATATTTGTTATACCATATGATG
AATTTGTACTTGATGTGCTCTAAAGGGACCAAGAGTATACATTTTAGTGATTTGAGGTCA
AAATGTGCTTTAGTCAAATAGTATAAGGGATAAAGTTTAAATTCTCAATAATTTAGAGGA
CTAAATGTGAAATTATATCCCATTTCAATTTGGCTAATTGCATTTTTTAATTTGTATCTG
ATTTTTTTTTTTTGTATATTTCAGCTAGATGAATGGGTGCTTTGTCGCATTTATAAGAAG
AATTCAAGTGGACCAAAACCTCTTATGTCTGGTTTACACAGCAGCAATGAGTACAGCCAC
GGTTCATCGACTTCGTCCTCATCCCAATTCGATGATATGCTTGAATCGTTACCAGAAATG
GATGATCGATTCTCCAATTTACCGAGATTAAACTCTCTTAAGACCGAGAAATTGAACCTT
GAACGCCTGGATTCAGCCAATTTCGATTGGGCAATCCTTGCTGGGCTCAAACCAATGCCG
GAATTGCACCCAGCAAATCAAGCTTCAGGCGTTCAGGGTCAGGCTCAGGGGAATGTCAAT
AACCACATCCACAACCACAACAACAACAATATGAATTTTCTCAACGATGTTTATGCCCAT
CCTACTACGAATTTCCGAGGCAACACCAAGGTTGAAAGTATTAATCTAGACGAAGAAGTT
GAAAGCGGGAACAGAAATCAACGGATTGATCAATCGAGTTACTTCCAGCAGAGTCTGAAT
GGATTTTCCCAAGCGTATACGAACAGTGTTGATCAATTTGGAATCCAATGTCCGAACCAG
ACGTTAAATCTGGGGTTCAGGCAGTAGGACACGCTGAAAAGTAAAAAAATTGTAACTTGA
AATCTGAATGCCAGTATACTGTATGTACAGAAGATCTGGATTTAGATTTCCTTGCCCCAA
CGGATTCGAAGAAAGAGCAAGTACAGTTTCATGGCCAAGGAAATTAACGTCTTCGAATGC
AAGTTGTGTCTGAAGTCATTAGGCTGAGGGCACGTCCGCTTGGAACTTTTTTGCAAGTTG
TATCTGAAGTCATTAGGCTGAGGGCACAAACAGGAAATATATGCAGGGGCATGTATATTC
TTTTAGGTACTGGGCTTATAGTTTGTTTTATTTTATGATACATTTCCAGATTTGGATGTA
TTTTGTAATTCTTACATTTCTGTGTAGCAAGTTATAGAAGATATATAGAAGTTACTTTTA
AAATATTTTAAAATTTT
