Microarray Probes on PGSC0003DMT400039410
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22352_PI426222305 |
JHI_St_60k_v1 |
ACTACAGATCTATAACAGCAAAGAACTTCCTGACATCTGTTAGAAGGTATCAAGGGGAGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039410
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039410 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G48530.1 |
+3 |
5e-165 |
479 |
276/417 (66%) |
SNF1-related protein kinase regulatory subunit gamma 1 | chr3:17987559-17989592 FORWARD LENGTH=424 |
Transcript Sequence (1592 bp)
>PGSC0003DMT400039410 1592 pgsc_dm_v3.4
TAATAATTGGATCACTTTCTTAAAAAAGCAACAAATTCTTGATTTATTTGTCAATCACTC
TGTAATAACCACAAGAGAAAAAAAAAATGGTGATGGAAGAAGGATGTCAAACACCAAGAA
GCCCAGAAGCAAAAGTTGGTATGCAAGTGGAAGATCTATGGGATATACAAGAACCACAGC
TTAGTCCTACTGAAAAGCTAAACGCTTGTTTTGAAAACATTCCTGTTTCTGATTTTCCTC
CTGCTCCTTCTAATCAAGTTATTGAGATAAATTCTGATGCAACTTTGGCCGAAGCTGTTA
AGTTACTATCACAGCACAAAATATTAAGCGCACCTGTTGTAGATGTTGATGCCCCTGAAG
ATGCTACTTGGATTGATAGATATATTGGCATAGTGGAATTTGCTGGCATTGTGGTATGGA
TCCTCCATCAGTCGGAAAAGATGGAGGGCACCTCTGCTTTTGATTCGGTAATGAATGCAG
CAGATGATACACTCAGCCCTGCTTTGGCTGCAGCTGTTAACGGAGTCGCTTCTCCAAGAT
TCAGAAGTTTGCATCCTGAATCTCCAACAGCGACTTCTGGTAACTTTTTTGAGACGTTAA
CTTCGTCAGATCTCTACAAGAACACAAAGGTTCGGGACATTTCAGGGTCATTCCGCTGGG
CTCCATTTCTGGCTTTGCAGAAATCAAACTCCTTTCTGACAATGCTTCTCTTGTTATCTA
AATACAAGATGAAGAGTATTCCCGTGGTTGATTTAGGGGAATATAAGATTGATAACATTA
TAACTCAACCTGCTGTTATACACATGCTAGAAGAATGTGCTGGTCTCCATTGGTTCGAGA
GCTGGGGTTCAAAGAAATTATATGAACTTGGTCTTCCTTTAATGAAGCCAAGTAGCATCA
TTCAGGTGGATGAGGATGAACCAGTGCTGCAGGCATTCAAGTTGATGAGACAGAATGGTG
TTGGAGGAGTCCCCGTGGTCGAAAGTGGTGGCAGGAAAGCTATTGGTAATATAAGCATCA
GAGATATTCAGTTCCTCCTGATTGCTCCCGAAATTTACAAGGACTACAGATCTATAACAG
CAAAGAACTTCCTGACATCTGTTAGAAGGTATCAAGGGGAGCACGAAAAGAACTCCCCAT
TCTTAAGCCACATGGTTACTTGCAGAAGAGGTAACAGCCTTAAAGACGTTATCATGAAGC
TCGACTCGAAGAAGATCCACAGGATCTACGTTGTCGATGACATGGGAAATCTCGAGGGGG
TAATCACACTCAGAGACATAATCTCAAAGCTAGTACACGAACCGCGTGGTTACTTTGGTG
ATTTCTTTGATGGTGTTTTGCCATTGCCAGCAAATAGCAGGGTTTAAGTCCTTAGTCCTA
ACAACTTTAAGAACTTTATGCTGATCCTTTACTTCCCTAATGAACTTAATAAGTTTAACA
TGTGTGAAGTTTTGTTTAAATTTTAGGTTGTTTTCTTGCAGGATGAGTTTCTTGTAATTT
TGGGTTGTTTTTTAAAAGTAGATTTCTTTCTTGTGTACACAAGACACTTCTTGGTACTCT
TGAAATTGAAAGAAATGCAAAGCCTTTTTTTC
