Microarray Probes on PGSC0003DMT400039384
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_22391_PI426222305 |
JHI_St_60k_v1 |
AAGAAGCGAGACAGTATGGTCTAGCTTTCGATTTGCACGAGAGGTTCTATATAGTCCCAG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039384
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039384 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G63160.1 |
+1 |
5e-125 |
374 |
202/306 (66%) |
BTB and TAZ domain protein 1 | chr5:25333485-25335399 REVERSE LENGTH=365 |
Transcript Sequence (1609 bp)
>PGSC0003DMT400039384 1609 pgsc_dm_v3.4
GCTATATATACGGAGACATGCGAACCATGAATCTACACTGAATTATTAAACCCTGAGGAG
AAAGAAATAAAGAAAAAGTTCATTGAATACATATTATTACTCTTCTAAAACTTGATCGTT
ATGTCGCCGAATAACTTTGACGCCGGCGAAATGCCGGAATTCGACATTCAAATCATCACC
TCCGGTGGACACCGCATTCCAGCACATTCTACTGTTCTGGCTTCGGCTTCATCAGTTCTG
GAAAGCATTCTAGTTCGGCCGCAGAAGAAGCGGAGCTCGGAGAAAACTATCCGGATTCTC
GGTGTTCCCTGCGATGCCGTTTCCGTGTTTGTTCAATTTCTCTCTTCTTTCAAGTGTACC
AAAGAGCAGATGAAGAAACATGGAATTCATCTTCTAGCACTTTCTCATGTGTACTTGGTA
CCACAGCTAAAGCAGAGATGCACAAAGGGGTTAGCTGAGCAATTGACTATTGAAAATGCT
GTGGATATGCTTCAATTGGCTAGGCTCTGTGATGCACCTGATCTATATCTGAAGTGCTTG
AAATTGATATCAACAAATTTCAAGAAAACTGAAAAGACTGAGGGTTGGAAGTTCCTCCTA
GATCATGATCCTCAACTCGAACTTGAAATTCTGCAGTTCATGGATGAGGCTGATTCGAGG
AAGAAGAGGACAAGAAGGCATAGAAGAGAGCAGAACTTGTATTTACAGCTAAGCGAAGCG
ATGGATTGTATAGAGCACATATGCACTGAAGGATGCACCAGTGTAGGGCCATGTGGTGAG
GAGCCCTGCACAAAGAAGCTGCCATGTAGCAAATTCAAAACATGTCAAGGCGTCCAGCTA
CTGATTCGACACTTTGCTACATGTAAACGAAGGGTGAATGGAGGTTGTCTGCGATGCAAA
AGGATGTGGCAGCTACTTAGATTACATTCGTCTATCTGTGATCAACCTGATGAATGTCGA
GTTCCACTGTGCAGACAATTCAAAGAGAAGGTGCAACGAAAGGGAGATGATGGGCTATGG
AAATCACTTGTTGAGAAGGTGGTGTCGGCCAGAGCTTTGTCCTCTTTATCTCTGCCCAAA
AGGAAGAGAGAAGAGGAACCAAAAATGAACTTACACCATCATCAAGTGAGAAGCTTCTTG
ACAACACAGTGTCACTAAAAGTTTAGACTACTACTATATAATTTGAGAAGGAATTGAAGA
TAGAATGTTAGTATATATGTTCTAGTGTAGTGGCTTTCCTCTGTGTGCCAGTCTTGAGTT
GGAGAAATCCTCATAAATTTGGGGTATTTCAGCAGTAGAATTGTTAGGAATATTGAATTT
TGTACATGTAGTGGATGGTTGCCAGTTTTTATGTTCCTCCAATTTGCTCAATGATCTAGT
AAACTTGTGAGGTAATTTATTGTTATTGGCTTCAATATGTTGAAGTTTTGTTTCTTTTAT
AATCAAGTGTCATGTGGAAATTAGTGAAATAAACTTATAATTCTTTGAAGCATCTTGGAT
TCTATTTTCTAACGCTGCTGAAATCACTAAAGCGTTATTTTGATGATTAAAGAAGCGAGA
CAGTATGGTCTAGCTTTCGATTTGCACGAGAGGTTCTATATAGTCCCAG
