Microarray Probes on PGSC0003DMT400039067
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51469_PI426222305 |
JHI_St_60k_v1 |
CCTCTAACTGGTCAAAATGGGATCATAAGAACTGTTTGTGGAGCTATAAATTGATTTTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039067
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039067 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G14550.1 |
+1 |
2e-114 |
338 |
171/263 (65%) |
Peroxidase superfamily protein | chr1:4979028-4980324 FORWARD LENGTH=321 |
Transcript Sequence (1035 bp)
>PGSC0003DMT400039067 1035 pgsc_dm_v3.4
AATAAACATCTATAATTCTTTCATATCATCCATCAACAAACTTTGCATTTTAATTTCAAA
ATGACAAGTTCAAACAACTCTTTTGTTGTTATATTTTCTCTACTTCTACTATATTCTACC
ATGCAATGCCATGCACAACTTTCTTCCACATTCTACGACCGTACATGCCCTAATGCTCTC
ACCACTATTCGTACAACTATTAGACAAGCAATTTCAAGCGAACGGCGTATGGCTGCATCC
CTTATTCGTCTTCATTTCCATGATTGTTTTGTTCAGGGTTGTGATGCTTCTCTCTTGCTT
GATGAAACCCCAACGATTGTCAGCGAGAAGACTGCGCTGCCAAATCTTGGATCAGTTAGA
GGCTTTGGTATTATAGAAGATGCAAAAAGAGAGGTTGAGAAAACATGTCCTGGAATTGTA
TCGTGTGCTGACATACTTGCAGTTGCTGCTAGAGATGCATCAAGTCTCGTTGGCGGTCCA
TCATGGACAGTTAAACTCGGAAGAAGAGACTCAACCACTGCAAGTCATACTCTTGCAGAA
ACTGATCTTCCCGGTCCTTTCGATCCTCTTAGTAGGCTTATTTCTGGCTTTGCCAACAAA
GGCCTTAGCACAAGGGATATGGTTGCTTTATCAGGATCTCATTCAATTGGACAAGCACAA
TGCTTCCTTTTCCGTGATAGAATTTATAGCAATGGAACAGACATCGATGCTGGATTTGCT
AGCACTAGAAGACGTCAGTGTCCTCAAGAAGATCAAAATGGAAACCTAGCTCCACTTGAT
TTGGTAACACCTAATCAATTGGATAACAACTACTTCAAGAATTTGAGGCAAAGAAAAGGT
CTTCTTTCAAATCAGATCAAGTTCTTTTGAGTGGAGGGTCTACTGATGATATTGTTTTAG
AATATAGTAATAGCCCTCGAGCATTTGCCTCTGATTTTGCTGCTGCCATGATTAAAATGG
GAGATATCAGTCCTCTAACTGGTCAAAATGGGATCATAAGAACTGTTTGTGGAGCTATAA
ATTGATTTTTCAAAG
