Microarray Probes on PGSC0003DMT400039065
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51468_PI426222305 |
JHI_St_60k_v1 |
GTCCTCTAACTGGTCAAAATGGGATCATAAGAACTGTTTGTGGAGCTATAAATTGATTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039065
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039065 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G14550.1 |
+1 |
1e-141 |
407 |
204/314 (65%) |
Peroxidase superfamily protein | chr1:4979028-4980324 FORWARD LENGTH=321 |
Transcript Sequence (997 bp)
>PGSC0003DMT400039065 997 pgsc_dm_v3.4
TTGGCATCATACATTATACACACTTTCCAAATGATGACTACTTCAAACAAATCTTTTGTT
GCTATATTTTCTCTTCTCTTACTCTCTAGCATGCAATGTCATGCACAACTTTCTTCTACA
TTCTATGACCGCACTTGCCCTACTGCTCTCACCACTATTCGTACAAGCATAAGACAAGCA
GTTTCAAGTGAACGTCGCATGGCTGCATCCCTCATTCGTCTTCATTTTCATGATTGTTTT
GTTCAGGGTTGTGATGCTTCTATCTTACTTGATGAGACTCCAACAATTGTAAGCGAGAAG
ACTGCATTGCCAAACCTTGGATCAGCTAGAGGATACGGTATTATAGAAGATGCAAAAAGG
GAACTTGAGAAAACATGTCCAGGAATTGTGTCATGTGCAGACATACTTGCAGTTGCTGCT
AGGGATGCATCCACTCTCGTTGGAGGTCCATCATGGACGGTGAAACTCGGAAGAAGAGAT
TCCACCACTGCAAGTCATACTCTTGCTGAAACTGATCTCCCAGGTCCTTTTGATCCTCTT
GATAGGATTATTTCTGGCTTTGCCAACAAAGGCCTTAGCACAAGGGATATGGTTGCTTTA
TCAGGTGCACATTCAATTGGTCAAGCACAATGTTTCCTTTTCCGCGATAGAATTTACAGT
AATGGAACAGACATCGATGCTGGATTTGCTAGCACTAGAAGACGTCAATGTCCTCAAGAA
GATCAAAATGGAAACCTAGCTCCACTAGATTTGGTTACACCCAATCAATTGGATAACAAT
TACTACAAGAACTTGATTCAAAGAAAAGGTCTTCTTCAATCAGATCAAGTCCTTCTTAGT
GGCGGGTCAACGGATAGCATTGTTACTGAATATAGCAACAACCCTCGCACATTTGCCTCT
GATTTTTCTGCAGCTATGATTAAAATGGGAGATATTAGTCCTCTAACTGGTCAAAATGGG
ATCATAAGAACTGTTTGTGGAGCTATAAATTGATTTT
