Microarray Probes on PGSC0003DMT400039064
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_51470_PI426222305 |
JHI_St_60k_v1 |
GTCCTCTAACTGGTCAAAATGGGATCATAAGAACTGTTTGTGGAGCTATAAATTGATTTT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400039064
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400039064 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G14550.1 |
+1 |
4e-141 |
406 |
205/315 (65%) |
Peroxidase superfamily protein | chr1:4979028-4980324 FORWARD LENGTH=321 |
Transcript Sequence (1027 bp)
>PGSC0003DMT400039064 1027 pgsc_dm_v3.4
AATAAACATCTATAATTCTTTCATATCATCCATCAACAAACTTTGCATTTTAATTTCAAA
ATGACAAGTTCAAACAACTCTTTTGTTGTTATATTTTCTCTACTTCTACTATATTCTACC
ATGCAATGCCATGCACAACTTTCTTCCACATTCTACGACCGTACATGCCCTAATGCTCTC
ACCACTATTCGTACAACTATTAGACAAGCAATTTCAAGCGAACGGCGTATGGCTGCATCC
CTTATTCGTCTTCATTTCCATGATTGTTTTGTTCAGGGTTGTGATGCTTCTATCTTACTT
GATGAGACTCCAACAATTGTAAGCGAGAAGACTGCATTGCCAAACCTTGGATCAGCTAGA
GGATACGGTATTATAGAAGATGCAAAAAGGGAACTTGAGAAAACATGTCCAGGAATTGTG
TCATGTGCAGACATACTTGCAGTTGCTGCTAGGGATGCATCCACTCTCGTTGGAGGTCCA
TCATGGACGGTGAAACTCGGAAGAAGAGATTCCACCACTGCAAGTCATACTCTTGCTGAA
ACTGATCTCCCAGGTCCTTTTGATCCTCTTGATAGGATTATTTCTGGCTTTGCCAACAAA
GGCCTTAGCACAAGGGATATGGTTGCTTTATCAGGTGCACATTCAATTGGTCAAGCACAA
TGTTTCCTTTTCCGCGATAGAATTTACAGTAATGGAACAGACATCGATGCTGGATTTGCT
AGCACTAGAAGACGTCAATGTCCTCAAGAAGATCAAAATGGAAACCTAGCTCCACTAGAT
TTGGTTACACCCAATCAATTGGATAACAATTACTACAAGAACTTGATTCAAAGAAAAGGT
CTTCTTCAATCAGATCAAGTCCTTCTTAGTGGCGGGTCAACGGATAGCATTGTTACTGAA
TATAGCAACAACCCTCGCACATTTGCCTCTGATTTTTCTGCAGCTATGATTAAAATGGGA
GATATTAGTCCTCTAACTGGTCAAAATGGGATCATAAGAACTGTTTGTGGAGCTATAAAT
TGATTTT
