Microarray Probes on PGSC0003DMT400038275
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_46778_PI426222305 |
JHI_St_60k_v1 |
TGTACTCCGGCCCATGTTTGCATCAAGTTAATCAATAATTGTTTGTAATTTGTTTCTTGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400038275
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400038275 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G10760.1 |
+2 |
4e-42 |
157 |
118/386 (31%) |
Eukaryotic aspartyl protease family protein | chr5:3400671-3402165 REVERSE LENGTH=464 |
Transcript Sequence (1491 bp)
>PGSC0003DMT400038275 1491 pgsc_dm_v3.4
GTCAAAAAGCACAACAACACACAACACAAAAAAAATAATTCTGTTTTGAATACTTTCATT
CTACACATATATGGCTTGGATGTATAAACATATTCCTACAACATGCTTCTTTTTGGTCGT
GTGTTATCTAACAATAAAAGTAGTGCCTATTCTTGGAGAAAAAGCACCTCACCCTCAGTT
TCAGGTGGAACCAAAACCTAACTGCCAGAGCTCAGGTCCAATAATTGGATCGCAAAGAGT
TTCAAATCCTTGTTCTCCAAATGCTAATTTGACGAAAACTCCATCAGCTGGCAAATCTGT
AAACAAGAATCAAGCTAGAGTTCGTTCAATGAATAAGAAACAGAATCGCCATCATTATCG
TTACACTCTTTCTGATAATGAATATGATCCTAATGCTGATTATGGATTGTTTACCGTAAA
GATAAGTCTGGGCTCACCACAACAATATTATAGTTTAATTGTGGACACTGGTAGCCGTTG
GACTTGGGTACGTTGTCGATTTTGCAGAGAAGGTTGCATTTCAGATGATCCCCCGTATGA
TCCTTCAAAATCATTGTGCGATTATACATTAACAATTCCCTTTAAAGCCTCTTATGATGA
TACGTCATTTGCAAACGGCATTTGGGGATGTGACAATCTCACTATAGATGATTTTGGTCC
AATAATGAACTTTCAATTTGGTTGTGTCCTTGAAAACTACGATGGCAATGGCGATAATTT
TGTTAATGCAGCTGGAATTCTTGGACTTGGCAAAGGAGAATGGTCATTGACATCTCAAAG
TGGTGCATCAATGCAAGTGTTTAGCTATTTTGTCCCAGAAAATGGTGGTGGTGCAGATCT
ACAATTTGGGGATAAAGCCAGAGAAAAATCTAACACTTGTACAAATCAATTTACACCAAT
GGTACAAAGTGACCATGAAGAGAAATACTATATTGATTTAGTTGGTGTAAGTGTAGATGG
AAACGAACTCAATGTTCCATCGACTGAATTCATGTCTCGAGGGACAATTATAGACAGTGG
AACGACCATTACTCGATTGCCAGAAGTGGTATACTCTGCATTTCGTGATGCTGTTAGACA
GTCCATGTCGAGTTATACATTATTAGACGAAATCGGTGAGCTAATGGATACCTGCTACAG
CTTAGAGGGATTAATCGAACCAATCGCGTTTCCAGAGATTAAATTCCATTTTGGGGAAGT
GAATACTATTGATGTGATTTTGACAAAGGAAGGAACAATATGGAGGAAAAATGGTACAGT
AAATTGTTTGGCTTTTGCTGCAGCAGAAAGCTATAGCATTATTGGTATTGTTCAACAGCG
TGGATTCAATGTGCTTTATGATTTAGAATGGAAAACAATTGGATTTGGCACTAACTGTAC
ATGATTACTTGTATAATCGTTTTTAATGGTTCTTCTTGTTGTAGTATTACCTGTACTCCG
GCCCATGTTTGCATCAAGTTAATCAATAATTGTTTGTAATTTGTTTCTTGC
