Microarray Probes on PGSC0003DMT400037956
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_30793_PI426222305 |
JHI_St_60k_v1 |
TTGCGTGTAATTATTTCTTGTTCTTCTAAGAGAATGTATCTCAACTTTCCATTGGTGGTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037956
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037956 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G19260.1 |
+2 |
4e-20 |
88 |
62/236 (26%) |
Protein of unknown function (DUF3049) | chr5:6479494-6480360 REVERSE LENGTH=288 |
Transcript Sequence (857 bp)
>PGSC0003DMT400037956 857 pgsc_dm_v3.4
TAGACCCGCCCCTCCCCCCTCTCCCCTCTCCGCCCCACCAAACCCCCAAGTGGTACCTTC
TCACTCCTATAAATTCATGCTCTGTTTTTGCTCTGTTTTTTTTTAGTACAACAAAACTTC
CATTATGTCTCAAAATCTTGAAGATGTGAGTAGTTGGAGCTTCATACAAATCCTCAACAA
CCCTTCTACCTACCATCATCAACTCGATTATAAAGAAGACGATAATGATAACGTCTACAT
TCACCCTTCTACGAAGCTATCTTCTCTCGTCATGAGCACGAAAAGCTTGGAGATGTGCAC
GGAGAGCTTAGGAAACGAGACGGGTTGTTATTTCAACGAAAGCATGGAGGAAAGGGACAT
TTCTCATGGCGTTCAACGATCAAAATGTCGAGAATTCAAGAAAAGAATTAAAAGGACAGT
GAATTTCCCACCTCCGCTGACTTCAATCAGCGGAAATGAGAGGGTTAGAATAAGATCTCA
CCGTGAAGGTGGTCGTTTAGTGTTAAGAGCTGTAAGCATACATGCTTGCAGCTCTTACTT
TAAAGCAGAGCGTGCCAATGGCACGCTCACGCTTTCGTGGCGAAATGATGGTACTAGTAG
TAAAGTTGCACAAATGGCTGAAGTTGAAAATGGTGAAGAGGCAAATAGTTGTAGAAAATT
AACTAGTGAAATTGGGATACCAAGAAGGTGTAAAGAAAAAAGTGGAAGTAGAATTAAAGG
GATTTCAAATTGGGGCCAATTTTGGGTGGCCATTTCCTAAAATACTAGTATATTGTAATG
GTGATGTTCGAACCATCTTGCGTGTAATTATTTCTTGTTCTTCTAAGAGAATGTATCTCA
ACTTTCCATTGGTGGTG
