Microarray Probes on PGSC0003DMT400037607
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32183_PI426222305 |
JHI_St_60k_v1 |
CTGTTTTGTATGAATAAAAATGTTTTGTAACTACTCATTGCTGTCCTCGTTGTTTACCGC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037607
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037607 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G11460.1 |
+3 |
8e-42 |
155 |
135/389 (35%) |
Protein of unknown function (DUF581) | chr5:3657064-3658388 REVERSE LENGTH=344 |
Transcript Sequence (1913 bp)
>PGSC0003DMT400037607 1913 pgsc_dm_v3.4
ATTTACTGATTTTGATGCAAATTGTGAGAGAAAGAGAAAGAAAAAGATGTACTGAAGAAG
CCACACACACACACACACACACACACTACTGTGAGAGATAAAGGGAAAGAGTTCTTCTCT
TTTCATTTATACTTCTTCTCGCACAAACTAAATTCTCCCATCTTTGAAGCTTCTGGAACT
AATCTACCAGGTGTTGGTGGACTTTTAGGGCTGAGGGTTTAAGGATAATGCTGAAGAAGA
GGACCAGATCACACCAGAAAGTTCACACAATGGGGCATTTGATGTCTGATGGTATCTCAG
ATTCTTATTTTCAATCTGATGTTTTGGTTAGGAAACATAAAAGTAATTCCTTTTTTAATG
TTCCTGGTGTGTTTGTTGGGCTTAATCCTAAGGGTTCAGAATCTGATTCAGTGAGAAGTC
CTACTTCTCCACTGGATTTTAGGGTCTTTTCAAATTTGGGAAACCCCTTTAGGTCATCAA
CTAGTGAGGGGGCTGGGGCTAACAAGACATGGGGTTGTACTAAAGTAGGCCTTGGCATTG
TAGATTCTCTTGATGATGAAATGAAACAATCGGGGAAAGTTTTTCGATCATCCGATAGTA
AAAATATTCTTTTTGGCACACAAATGAGGATCAAAACACATGATTTTCAGAGCTGTGTTG
ATGATTCTCTTGAGGAACCTAAGTCACTCCCTAAGAATATCTCGATTTTTCCTCATACTT
TGTCCAAAAGCTCCAATCTTCGAAAGGGAAGTTCTGATGTTGTCTTTGGAATTGGAGATG
CCCTGTCGGAGCATGAGTTATCCAGAAATTTTCGTTCTTGTTCTCTAGACTCTGGAAGGT
CTAGCTCACGTTTCGCAAGCTTGGCGAACCGTACTGTGGCTTTTGGTTCTGAAAATGCAA
TAAATCCAGTGGTTTCACATACTAAATGTGTTAGAGGTTGCTCAAAGTTGGGCAATCCTG
CAGGTGGTGCGAAATTGAGTCCTATACCCACACCTGTTGGCTCTAACACTAGCTTAGTTG
GTTCTATTTCAGCTAGTGACATTGAACTTTCTGAGGACTATACCTGTGTGAGAACCCGTG
GACCCAATGCCAAAGTAACTCATATCTTTTGTGACTGCATTTTAGAATGTCACAACAATG
AGTTACCCAATTTTTGTAAGAATGCTAATGAGAAAACCGTGCTGCCTGAGGTGACGGACA
GCTCAGAGGTCCTCACTTCATTTCCTTCAAGCGATTTTTTGCGCTTCTGTTCCTCTTGCA
AGAAGAGGCTGGATGGAAAAGATATTTACATGTACAGAGGTGAGAAAGCTTTTTGCAGCT
TGGATTGTCGGTCTGAGGCGATTTTAATTGATGAGGAGATGGAGAAGAAAGTCAATAATC
ATTCTGAAAGCACTATTAAGCCAAACAGCCGTGATGAAGTTTTTGACACCGGCTTGTTCA
TCGTTACATAGGATGCCGGAATTGCACTGCTGTAGCTACTAAGCCCATGATTGATGAAAC
CGCCGCACTGGTTAACAACTAGACACCCGGGTCATCTGTTTACTAAGAGCTGTTTTTTTG
TGCATCTTTGTGCAGCCATGGGTGATCAGATCATGTATTGCTACTTGTGTGAACTGTCTT
TCCTTTCTCATGGTCTTAGTGGTTAACGGTCGCAAACTGCGAATTTTGCTTTATATAGTT
CTGAATTTGTTATGTAATAGTGGAGTATAATCTCAAAAAAAAAAAGGATAAGAAACTTAA
CTAGAAGGGTTGTAGCCCATCCTTGTGGCTCCCCAAATTTTGGTTTCTCACCAAGCTGAT
ATTACCTGTCAAAGTTTGATAAATACAAATGTTTATGACTACATACATTACTTCTGTTTT
GTATGAATAAAAATGTTTTGTAACTACTCATTGCTGTCCTCGTTGTTTACCGC
