Microarray Probes on PGSC0003DMT400037563
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_32168_PI426222305 |
JHI_St_60k_v1 |
CCTGGATGACACCTCAATTAGATTTGGAAACATGAAAGAATGTATCCATAAATGACTCTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037563
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037563 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT2G05920.1 |
+1 |
0.0 |
850 |
452/737 (61%) |
Subtilase family protein | chr2:2269831-2272207 REVERSE LENGTH=754 |
Transcript Sequence (2805 bp)
>PGSC0003DMT400037563 2805 pgsc_dm_v3.4
CGGGAGTATATAATCTCATAAAACTTTAACTTAGTGGTCCAACTACTGATTACACTACTT
CCCAAAGGAACCAATAACTGCCAAATCTATTTAGCTCTTTTCTCTCTTTCACACAGAGCA
CCGCTACTACAACTTCCTCTTCCTTCTTTCTACTGTTTTCTTTGTTTACTAAAAAAAATG
GAAGCTGTAGTAATAATCTTGTTATCCACCATTAACATACTTCTCTTTCTCCACTCATCA
ACATCAACATCAGCAATTCCCATTTCCACCAAAAAAACCTACATTGTTCACATGAAACAT
CACCTCAAACCTCCATCATTCTCCACTCATCATCAATGGTACAAAACCCATCTCCAATCT
CTCACTTCTTCCACCCAAAACTCTCTTCTCTACACTTATACCACCGCTTATCACGGATTC
GCCGCAAGTTTGGATTCTCATGAAGTTGAATTACTCCGTCAATCTGATTACGTTGTTAAT
ATCTACGAAGACACTTTTTACACCCCACAAACAACGCGCACACCTGAATTTCTCGGCCTC
GATAAGCTCGATTTTGGGGATGGACGTACTTTACCGGATTTCAACACGGCTGCTCAGGAT
GTTATAATTGGGGTACTTGATACTGGAGTCTGGCCGGAATCGGAAAGTTTTAGTGATTTG
GGTATGTCGAATGTGCCGTCCAGATGGAGAGGGAAGTGTCAATCGGCGCCGGATTTTGAT
CCGAAAGTGCATTGTAATAGGAAACTTATAGGTGCTCTGTATTTTTCTGAAGGTTGTAAG
GGCTGCTCCCAGGAGATTCAATCGCCCCGGGACCATGACGGCCATGGCACACATACTGCG
AGCACAGCGGCAGGATCAATTGTGGCAAATGCTAGTCTTTTTGGCTACGCCAAAGGGACT
GCTAGAGGGATGGCGCCACAAGCCCGCATAGCAAGTTATAAAGTGTGCTGGAATGAACTG
TGTGCAGGGTCAGATATTCTTGCTGCATTCGACCGTGCTATTATGGATGGTGTTGATGTG
TTGTCTGTGTCATTGTCTAATAATGAGAAGACTTATTATACTGACCCGATTGCTCTTGGT
GCTTTTGCTGCTATGGAGAAAGGGATTGTTGTGTCGTGTTCAGCTGGGAATGATGGTCCT
GTGGAATCAACAGTTGTGAACACGGCTCCATGGGTCATTACTGTTGGTGCTGCAACTCTT
GATAGAGATTTTCCAGCTACTGTCACACTGGGTAATGGCCAAAAACTTCAAGGCGTGTCG
TTGTATAGTGGAAAGGTAGAAATGGGAAATAAGTTGTTGAGCTTAGTTTACCAACAAGGG
GGAAACTCCTCTTTGTGCTTTCGTGGTTCGCTTGATCCAAACATTGTTGGTGGAAAAGTA
GTGCTATGTGATAGGGGGGGAAATGATAGAGTTGCAAAGGGACTAGTAGTGAAAGAAGCT
AATGGGGTAGGAATGATATTAGCCAATACACCTGAGACGGGGGAGGAGTTACTCGCGGAT
AGCCACATATTACCTGCAGTGACTGTTGGAAGGAAGGTAGGGGATGTAATAAGAAAATAT
GTGAAAACAGAAAACAATCCAACGGTTGTTTTCAGCTTTGGCGGAACAGTGGTAAAAGTG
AAACCATCTCCTGTTGTGGTTACATTTAGCTCAAGAGGGCCAAATGCAATTGTTCCCCAG
ATATTAAAGCCTGATGTTATTGGCCCTGGAGTGAACATCTTAGCAGCTTGGCCTCGAAAT
ATTGGACCAACTTCACTTAATATCGATACACGAAGGACCTCATTCAACATTGTTTCTGGC
ACTTCCATGTCTTGCCCTCATGTTTCAGGAGTTGCTGCATTGGTAAAAGCTGTACATCCA
GATTGGAGTCCAAGCGCGATCAAATCAGCAATCATGACAACCGCGTACACTCAAGATAAC
ACCAACTCCTCGTTTCATGATTCTGCACTATACGGTACATTTTCTAATCCATTTGTTCAT
GGATCAGGCCATGTAAATCCCCAGAAAGCATTTTCCCCTGGACTCGTATACAATATCAGG
ATTCATGATCATATCAAGTTCTTGTGCTCCTTGAACTACACCATAGATCAAATACAATCC
ATTGTAAAAAGACTCAATTTCACTTGTGCAAACAAGTTTGCTGATGCTGGGCAAATCAAC
TATCCTTCATTCTCTGTCTTGTTTGAGATTAACTCAAAGCGAGTTGTTCGTTACACTCGA
GAAGTGACCAATGTTGGAGCTGCAAGCTCAGTGTATGAAGTAGCCACTGATGCTCCTCCA
TCCGTTACGGTAACAGTGAAGCCAACAAAGCTTGTATTCAAGAAAGTAGGAGAGAAGCTT
CATTACACCGTGACATTTGTGTCCAAGAAAGATGTCAAACCAGGAAATGCATTTGGTTGG
ATTTCATGGAACAATGCTAAACATGAAGTGAGAAGTCCAGTTGCATATTCCTGGATGACA
CCTCAATTAGATTTGGAAACATGAAAGAATGTATCCATAAATGACTCTATCTTATAGCTA
GTGAAATGAAGGGGTTCGATAAAATACATAAAATTTAAATCTTAAATCCAACTTAATGTA
AAAAAAATTGTATTAGAATTGGTGGGGTGCGCCAGGCCCGTGCAATAGTGCAAAGCATGG
GCGACGCGCAAGAGCCCAGGTAGCAAGCTACCTTAATGGACTCTTCCCCTTAAATAATTG
AGTTAATATCGTGTGGATCAATGATCCACATATCAGATATTAAACTGATAAGAACAGATA
CTACACTTGATCTTAGCCAAAAGGCCGAGAAAGGTATGCTTATTT
