Microarray Probes on PGSC0003DMT400037472
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_15497_PI426222305 |
JHI_St_60k_v1 |
GCACAAGGTTTGTAGCTTAGTGGATATGGGGTTTGAAAGTTTATCTTTTTAGTCATGTTA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037472
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037472 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G17980.1 |
+1 |
4e-78 |
242 |
130/168 (77%) |
Calcium-dependent lipid-binding (CaLB domain) family protein | chr3:6152417-6153115 FORWARD LENGTH=177 |
Transcript Sequence (1159 bp)
>PGSC0003DMT400037472 1159 pgsc_dm_v3.4
GAAACTTCATTTTGAATAGCCTATTTCCTCTTGTTTCTCTTCCCTCAAATAACAACAATT
AATAAATAAATATTCATCCTAGCACCCTTCTCTTTCTTTCTTTCTTTCCTATTCCAAAAT
CAGAGCACCCTTGGCCTAATCAACATTCGAAAGAGATCGAGTTTGAGGTGGTTGGAGGGG
TGTTCGTGGAAAACGTTGGAACAAGAGAACCAATAATAAGTTTTGTACGTCCATAACATT
ATTGAATTATCATATATATATGTACACAGGTATTATTTTTGTTTAGTATATAATATAATA
TAAAGGAGGGGATAAAATAAAAAAATGGAGTCATCACCAGGAGGAGGAGGAAGTGCAACG
AAATCATTGATGGACAATCTTTTGGGTCTTTTGAGGATCAAAATAAAGAAAGGAGTTAAC
CTTGCTGTTCGTGATGTACGTACAAGTGATCCTTATTGTGTTGTCAAGATGGGTAAAAAA
CAGAAACTGAAGACACGAGTTATAAAGAAGGATATTAATCCTGAATGGAATGAAGATTTG
ACTCTCTCTGTTTCTGATCCCAGTCTTCCTGTTAAACTGACTGTATACGATCACGACACA
TTCAGCATGGATGACAAAATGGGAGATGCAGAGTTTGACATCAAATCATTTGTAGAGGCA
CTGAAGATGAACTTACATGGGCTACCATCTGGCACTGTAATTACAAGAGTACTGCCTTGC
AGGACAAACTGTCTTGCTGAAGAGAGTCGAGTTATTTGGGATGATGGTAAAGTTGTGCAA
GATATGATTCTAAGGTTGAGAAATGTTGAATGTGGAGAAGTTGAACTACAGCTTCAATGG
ATTGACCTTCCTGGTAGTAAGATTGGGTAGAAATTAATCAGGATATTTACTTTACTTGGG
ACCTGTTTTTTCTGTTCCTATAATTTAATGGTTTGTGGGATTTGAAATTGAAGTTTGATA
TATATAATATAGATCAAGTTTGATGAAGACCTTTTCACTCTGCACTTGTATGTGCACAAG
GTTTGTAGCTTAGTGGATATGGGGTTTGAAAGTTTATCTTTTTAGTCATGTTATTCGATG
GAATTACTTATGTTATATACTATGTAATAATGATGATACCCTTTTCTACAGAAAATTGCA
TACTTTTTTAAATTTTTTT
