Microarray Probes on PGSC0003DMT400037312
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25671_PI426222305 |
JHI_St_60k_v1 |
TTTTGTTGTTTGGGAGCCACCAGCAGAGCAGAAGATTATCTGGGTTACATTTGTTTTTTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037312
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037312 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT5G54780.1 |
+3 |
0.0 |
634 |
312/439 (71%) |
Ypt/Rab-GAP domain of gyp1p superfamily protein | chr5:22248696-22251692 REVERSE LENGTH=432 |
Transcript Sequence (2261 bp)
>PGSC0003DMT400037312 2261 pgsc_dm_v3.4
GGAAATTTGGAGGTACCAAGTCCTTTGATTCCCCGTCTTCCTCGCTAAATTTCTTCTACA
GGGAAAAAAAAACCACAACAATGGCTAGAAAACGAAGACCCAAAAAAAAGTAAGGCCACA
AAGAGGCAAATTTATAAGTTTTGAAAGCATTAAACAGCCAATTTTGTGTGTGGATGTGTT
GGGGGTTGCCATTAGAGAGAACAAATCAAAGAAAAGTGTGATAAAAACTGAAAATTTACA
ACAAAAAGAAGAAAAAAAGAAATCTTTTTGAAGAAAAAAAATATCTTTTTTCCCCCACCA
CCACAACGCCACCTCCAGCAAGAACAGCAAAAACAAAATCAGGAAGTAAAAGGACCCCAT
AGAAAGCCCTCTTTCTTGTTTTATTTTCTTTCAAGTTTTGGTTTTTTTGTTGTTTGGGAG
CCACCAGCAGAGCAGAAGATTATCTGGGTTACATTTGTTTTTTGCCACCAGCAGAGCAAA
GGGTTGTCTGGGTCATATTTATTTCTTGTTGGTGAGGTGCTGGGTTTTTTGAGATTGATT
TTTCGGATTGATTTGGGTGGATTTATATTATATCAAAGATGGCAAGTTTAGATATTACAA
AAATGTGGAGGGATCCTGGTGCTCCGGCTGATTCATTCTATCTGGTTCGGCCGGAATGTA
AGGATGTTCCCAAGTCCAAATTTAGAATTAAGAATGGGAAGACCCTAAGTGAAAGAAAAT
GGCGCGCTGCATTTTCTCCAGAAGGTTATCTTGATATAGGCAAAACACTTGGTCGAATTC
ATAGAGGGGGAATTCATCCATCAATTAGAGGTGAAGTTTGGGAATTCTTACTTGGTTGCT
ATGATCCAAAGAGCTCACATGCAGAACGAGAGGATATACGAAAACAACGGAGGACACAAT
ATGCTATACTAAAAGAAGAATGCCGCACAATGTTTCCGGTTATTGGAAGTGGTCGATATA
TTACTGCACCTGTAATAACAGAAGACGGCGATCCTATTCTAGATCCTTTAGTACTTCAAG
AGGCAAAAGCAGCAAAAGAGGCAAAAGAAGCTACTTCAGTAACAGGTGCTTCCGATGATT
ATGAAATGGTAAAGGAGGATGACAAAAGAGTAATAGAGTGGAAACTCTCGTTACACCAGA
TAGGACTCGATGTGGCTCGAACCGACAGGTCACTGGTCTTTTATGAGAAACAAGAGAATC
TATCGAAGCTTTGGGATATCCTTTCTGTTTATGCTTGGTTTGACAAAGATGTTAATTATT
GTCAAGGGATGAGTGATCTTTGCTCTCCAATGATTATTCTTCTCGATGATGAAGCAGATG
CATTTTGGTGCTTTGAACGTTTAATGAGAAGACTGAGAGGAAATTTCAGGTACACTGAGA
GTTCTGTCGGAGTAGAATCGCAGCTAAATAATCTAGCTTCAGTAACTCAAGTTATTGATC
CCAAACTTCACCAACACTTAGATAAATTAGGTGGAGGTGATTACCTGTTTGCTGTCCGGA
TGCTCATGGTTTTGTTCCGTCGAGAGTTTTCTTTTTGTGATTCATTATATCTTTGGGAGA
TGATGTGGGCGCTGGAATATGATCCAGACTTGTTTCTTACATATGAAGACCCTGAATTAG
CTGCGGACAAATCTGACGAATCTAAATCAAAAGCAAAGTCACGCCAGGTTGGGAAATTTG
AGCGAGAAAACATGAAAAATGCAGGCAAAGCTGCAGAAGCCCCCCTCCCTATTTCCGTTT
TCCTAGTAGCCAGTGTCCTGAAAGACAAGAGTGATAAATTGCTGACAGAAGCAAGAGGAC
TGGACGACGTTGTTAAGATACTCAATGATGTTAACGGAAACCTGGACGCTAAAAAGGCTT
GCACCGGTGCAATGAAACTTCACAGGAAGTATCTTAAAAAGGCGGCGAACACCCACAGGT
AGCCGAGCCAGAAGAAACTGCTAGGTGATTCATAAACCATGGAGCTCATACCAAGAAGGC
TCTAACAAGTTTGATACTCCGATTTTTCGGCCAAGTCAAGGGACAATGGCTGCTTTTGTA
TACTGTGATACTGATTTAGTAAAGAGAAATATGTAAATTGTCATTCTTTGTGGTTCCATA
TTTGGAACTATCATCATGTACATGTAAATTTTTTTCCAAGTAGTAAAAATGTGCCTTCAG
GGTTGATGTATACAAAAACGCTCTTCCAAAGCATGTAATTTATTTTACTTTTAGAGAGCC
ATGTTTAACATAATACTGCTATTTACTTATATATGAGAAAA
