Microarray Probes on PGSC0003DMT400037294
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_25691_PI426222305 |
JHI_St_60k_v1 |
AGACATTGTATCTTTCTACCAGTATAGTGATGCTATCAGTTTGTAATTTGACGTTTGTCG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037294
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037294 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT1G42550.1 |
+3 |
0.0 |
787 |
470/907 (52%) |
plastid movement impaired1 | chr1:15977131-15979734 FORWARD LENGTH=843 |
Transcript Sequence (3087 bp)
>PGSC0003DMT400037294 3087 pgsc_dm_v3.4
CTAACCCCTCATCATATCTCTACCACCAATTCTACATTGCAAAATCATTTCCCAAAAAAA
AAAAAAAAAAAAACTTATTTTCTTCTTTTTGTGAATTTCAAAGCATATAGTTCACTCGCG
TTGATCAATCAGGAAAGGTTATCTATTGTATCATACGACTTCTTGTAATGGCGGATTATG
TAACTAATAGAAGGAATTCCAATACACAATTATTGCAAGAACTTGAAGCACTTAGTGAAA
CACTCTATCAACCACCATCACATACTACAACAACTCGAAGAACCGCCTCCCTTGTCTTGC
CTCGAGATTCGATCCCTTCAATCGAGTCCCTAACAGGTGGTGCTAAAAATGACAACGATA
CTGATAGTATCGTTGTCAATCCTAAGCCGAGAGCCAGGCGGATGTCATTATCCCCCTGGC
GTTCTCGGCCTAAACAGGACATCCAGAGCGAGGACAATATACAACAACAAAGCAATACCA
GCACCAACACCAGCACCAGCAACACGAAGTTAGTTAAGAAATTGGATAGCAAAGGAGCTG
ATTCGAACTCCCAGAAGAAAGGCTTGTGGAACTGGAAACCAATTCGAGCTCTTGCTCACA
TTGGTAAGCAAAAGTTGAGTTGTTTATTCTCAGTTGAAGTCGTGACCGTTCAAGGACTCC
CAGCGTCCATGAACGGTCTACGACTATCTGTTTGTGTAAGAAAAAAAGAAACTAAAGATG
GAGCAGTACAAACTATGCCATCTAGAGTTTCACAAGGAGCTGCAGATTTTGAAGAAACAC
TTTTTATCAGGTGTCATGTTTATTATACACCCGGCACGGGTACTAGTAATGGAGGGGCTC
GATATAAATTCGAGCCCCGTCCATTTTCCATATTTGTCTTTGCAGTTGATGCAGAGGAAC
TTGATTTTGGAAAAAACATGGTTGATTTGAGTGAAATGATTGAGGAGTCAGTACAGAAGA
GCTTTGAAGGAAATCGAATTCGCCAATGGGATACGAGTTATACTCTATCCGGGAAGGCGA
AAGGAGGAGAGGTAGTTTTGAAATTGGGATTTCAGATTATGGAGAAAGATGGTGGAGTTG
GGATTTATAGCCAAGCTGAAGGGGGAACGAAAAACGCGAAGAGCTACTCGTCTTCATTTG
CTAGAAAGCAATCGAAAACGTCTTTTAGCGTCCAGAGTCCAAGAATGTCTAGTTTAAGTT
CAGCTAATTGGACTCCATCACAAGCAGGAACAACAGCAAATATTCAAGGGATTGATGAGC
TGAATCTAGACGACGAGCCTGTAAAGGAGGAGCCAGAGTCGAAAGCAGAGGATCTTGATC
TCCCTGATTTCGATATTGTGGATAAAGGAATTGAAATTCAAGATAAAGGAGTTGAAATGG
AAGATAAAGATGAAGCAACAAAAGAAGTAGGAGAGGAGGAGGAAGATGGAGACGAGCGAT
CAGAAGGAAATTCTGATAAAAGATCGGTATCATCTAGTCACGAGGTTGTTAAGGAAGTCG
TGCACGATCAAATGCATTTGACAAGATTGTCAGCACTAGATTCCATTGCACAGCAAATCA
AAGCACTTGAATCAATGTTTAAAGATGAAAACCAAGTTAAGATGGAGGAGGATGACTCTG
AATCCCAAAGGCTGGACGCGAATGAGGAAACCGTGACAAGGGAATTCCTCCAAATGCTGG
AAGATCCAGGCGTTAGTCAGCTCAAGACGGATAATCAAGAAACCCCCGCGTTAAAGCTGC
AAGGAGGAGGAGGAGGAAATGAAGATAACGAAAAGAGAGAATCGGGCATATTTATACCTG
ATCTTGCTAAGGGGTTAGGATGTGTTGTTCAAACAAGAAATGGCGGTTTTTTAGCAGCTA
TGAATCCTCTGAATACTGCTGTTTTGAGAAAAGACGCTCCGAAACTTGCAATGCAGATAT
CAAAACCATTTGTCCTTCCATCTATTCCGTCATCTATGAATGGATTCGAGTTGTTCCAGA
GAATGGCAGCTGCCGGGCTAGAGGAATTTACGTCCAAGATCTTATCAATGATGCCAATGG
AAGAGCTCATGGGCAAAACAGCGGAGCAGATAGCGTTTGAAGGCATTGCTTCAGCAATTA
TTCAAGGGAGGAACAAAGAAGGAGGTGCCAGCTCAAGTGCTGCTGAGACAGTTGCAGTAG
TGAAATCAATGGCAACAGCAATGAACACCAGCAGGAACGAGAGGATCTCTACGGGGATAT
GGAACATCAGTGACAAACCGTTGACAGTGGATGAGATTCTTGCATTCACACTGCAGAAAA
TGGAGGCAATGACAATCGAAGCATTGAAAATTCAGGCAGATATACCGGAAGAAGAGGCTC
CTTTCGACGTTCAAGCTATCAAGAAAGATGATGATGGTCACCCGTTGGACTCTGCTGTCC
CACTCGAAGACTGGACGAAATATGACAAAAGTGATAGTATAATGATCTCAGTTGTGGTTC
AACTGAGGGATCCATTGAGGCAATTCGAGGCAGTTGGAGGACCTATGATAGCACTGGTTC
AAGCAGTTCCTATTGATGAGGAAACTAACAACTTTGATGATGAGGAAAAGAAGTTTAAAA
TCGCGTGTCTGGCTATTGGAGGATTGAAAGTCAGGAGCGGAGGGAGGAAGAACACGTGGG
ACACAGAAAAGCAGAAATTGACAGCAATGCAGTGGCTAGTAGCTTATGGACTTGGTAAAA
TGGGGAAGAAAGCAAAGAAATCTTCACCACTAAAAGGCCAAGACTTGCTATGGAGCATAT
CATCGCGTGTAATGGCAGATATGTGGCTGAAATCGATAAGAAATCCGGATATCAAGTTCA
TCATGTAGACATACAGACAACAGCAAGGGTGGTGTAAATCGTTTTTTCGTCATTTTTGCA
CATTCCATAGAAATAAGCAACAGAAAAAGGGGGAAATTGTATAATGTTTGCATTTGTTTA
GGGTGCTATGCACAGGGCATGTGCACAACATCATTGTTTGTATGTTTTTTTCATAGAATT
TTGAAATGTTCTTCAGGATTGTAAATGAGACATTGTATCTTTCTACCAGTATAGTGATGC
TATCAGTTTGTAATTTGACGTTTGTCG
