Microarray Probes on PGSC0003DMT400037015
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_26433_PI426222305 |
JHI_St_60k_v1 |
GGTGCAGTTTGTACTCTAGCTAAGAAAATTACTACTCCATCAAATTTTGTTCATTTGCTG |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400037015
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400037015 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G23030.1 |
+3 |
0.0 |
588 |
317/473 (67%) |
MATE efflux family protein | chr4:12072857-12074365 FORWARD LENGTH=502 |
Transcript Sequence (1883 bp)
>PGSC0003DMT400037015 1883 pgsc_dm_v3.4
CAAAAACTTCTTCCTCGTTCGTTCCCTCATTATAAACTCTATTATCTCTTTCTCTCTTGA
AGAGAAAAATGTGTAAGCCGACAAGTCCACCATTCACCTGCAAATGCGATGCATATGCAG
AAAATAATTTCGTCTCCATTAAAGTTGCTGAAGAATCCGACATGTCTACCCCTTTGATAC
CTAAAAGCCCAACAAACGACACTTACCCCCACATAACCAACAAGAAAATAACTTCTCTTG
TCTTCAATGAAGCTAAATCCATTGCTAATATCGCTTTTCCTATGATTCTTACAGGCCTTT
TGCTTTACTCTCGCTCTATGATCTCTATGCTTTTTCTTGGCCGTCTCGGCGGTTTGGCTC
TTGCTGGCGGATCTCTTGCAATTGGGTTTGCTAACATTACTGGATATTCAATTTTATCTG
GTTTAGCCATGGGGATGGAACCCATTTGTGGACAAGCTTTTGGAGCCCAGAAGTATAATC
TTCTTGGGCTTACTTTACAGAGAACTGTTCTTTTGCTTTTATTAATTTCATTCCCAATTG
CTCTGTTTTGGGTTAATATGAAGACTATTCTGCTTTATTGTGGCCAAGATGAAGATATTG
CTACAGAAGCACAATCTTATTTGTTCTATTCACTTCCAGATTTATTCGCGCAATCTTTAC
TTCATCCGTTGCGTATTTACCTTAGAACTCAATCGATTACTCTGCCTCTGACTTGTTGTG
CGATTTTCGCGATTCTTCTGCATATACCCATAAATTTTCTTCTTGTTATTAAGCTTAATT
TGGGGGTTAGAGGAGTTGCTATGAGTGGGGTTTGGACAAATTTTAATCTAGTAGGTTCGT
TAATTGTATATATTGTTGTTTCTGGTGTTTACAAAAAGACATGGGAGAGATTGTCAATGG
AGTGTCTCAAAGGATGGAAATCGCTTTTGAATTTAGCGATCCCAAGCTGCATTTCAGTCT
GTTTGGAATGGTGGTGGTATGAGATCATGATTTTGCTATGTGGGTTGTTGATTAACCCGA
AAGCAACGGTTGCTTCGATGGGCATTTTGATTCAGACGACTTCATTAATTTACATTTTTC
CATCATCTCTTAGTTTCAGTGTATCAACTAGAGTTGGGAATGAGCTTGGAGCAAGGAGAC
CAGGTAAAGCGAAGGTAGCTGCCATTGTAGGCCTTGCTGGTAGCTTCATTTTGGGTTTTA
CAGCTCTATTTTTCGCGGTGACGGTGAGGAACGTTTGGGCCAAGATGTTTACTAATGACA
AAGAGATATTGGCGTTAACATCAGTTGTTTTACCAATAATTGGGCTTTGTGAATTGGGAA
ACTGCCCACAAACAACTGGCTGTGGGGTTTTGCGAGGAACAGCGAGGCCTAAAGTTGGGG
CAAATATAAATTTAGGATGCTTTTATATCGTTGGTATGCCAGTAGCAGTGGGGCTAAGTT
TTTATATGGGATTTGATTTTCAAGGATTATGGATCGGACTATTGGCCGCACAAGCCTCTT
GTATGCTCACTATGTTGCTTGTTCTGCTTCATACAGATTGGGAATTCGAAGCAATCAGAG
CCAAACAACTAACAGGAACTACCATTCTCGATGAAACGAAAGAAACAATTCAAGAAAATA
CTAGTAGTAATAAGCAACTCAATGAGAATTTTTTATGTTAACAATTTTAATCTTTAATTT
TTCTGTATAGAGGGGAGGGGGCAGGGGTGCATTCATAGGCTGAAAATGAAGCAAACTCTT
TTGGTAATTCTGGTGAGGTTCAAAATGGGAATATCACAGGATATGACAAGAGATTGTAGC
TGGAAAAACCAGCAAGAAGAAAAGGTGCAGTTTGTACTCTAGCTAAGAAAATTACTACTC
CATCAAATTTTGTTCATTTGCTG
