Microarray Probes on PGSC0003DMT400036837
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_6713_PI426222305 |
JHI_St_60k_v1 |
GATCATAGTAATACTAGTAAGCATATATAAACCACATGTCGGCAATGACGTGACTTTTTC |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036837
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036837 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT3G23240.1 |
+1 |
6e-60 |
192 |
119/192 (62%) |
ethylene response factor 1 | chr3:8295705-8296361 FORWARD LENGTH=218 |
Transcript Sequence (790 bp)
>PGSC0003DMT400036837 790 pgsc_dm_v3.4
CCTACTTGTATGGATATAAAAAGAGGAAGCCTCAACAACTTCTCCCCATAATGGACTATT
ACTAAAACAAGGTAGTCCACCTACTTCTTTTCAAATCTTTCTTGAAAAAAAAAACAAAGA
GAGAACACAATGAATTCTTCTTCTTCTAATTTTCTCTACAATCTCAATTTCAACACCTCT
TCCCTCCCATTCAACATAAATGATTCGGACGAGATGTTGCCTTATGGCCTTCTCGCACAA
GCTGACTCAGACACTACCACCTTAGTAACAAATAGTACTCCCATGGCCGAGCCAACACCT
TCATCAAAGGAAAAGAATTATAGAGGTGTTAGGCGTAGGCCATGGGGCAAATTCGCGGCG
GAGATAAGGGATTCAACTAGAAATGGAATTAGGGTATGGCTAGGGACATTTGATAGTGCT
GAAGATGCTGCTTTGGCATATGATCAAGCTGCTTTTTCAATGAGGGGTACAAGTGCAATC
TTGAATTTTTCAGTTGAAAGAGTTGTTGAATCTCTACATGAAATGAAATTTCATGCTGAA
GAAGGTTGTTCACCTATTGTGTCTCTTAAGAAGAGACATTCTACGAGGAAGAGGAAATTG
AACAAGAAAAATAAAATAAGTAGGGAAGTTGTAAAAGATGAGAGTAATTCTAATGTTAAT
ATAGTAGTGTTTGAAGATTTGGGTGTTGATTATTTGGAACAACTTTTGAGTTCAAGTGAT
CATAGTAATACTAGTAAGCATATATAAACCACATGTCGGCAATGACGTGACTTTTTCTTC
TTCTTTTTTT
