Microarray Probes on PGSC0003DMT400036399
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48583_PI426222305 |
JHI_St_60k_v1 |
CGGTAACGTTTAGACCCTCTTGTTTGTACTTCTCTCTTCAGAGAATTGTTATTACTAATA |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036399
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036399 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G36220.1 |
+2 |
4e-111 |
345 |
193/506 (38%) |
ferulic acid 5-hydroxylase 1 | chr4:17137584-17139619 REVERSE LENGTH=520 |
Transcript Sequence (1669 bp)
>PGSC0003DMT400036399 1669 pgsc_dm_v3.4
TTCCATTAGAGGTTATAATTAGAAATTAGTGACTTAGCTAGCCATGACTTTGATATGGGA
AACACTAGTAGTAGTTTGTATTGTGTATGCCTTGTATGAGCTCCTAAATATCCACAAGAG
AAAAAAGTTTCCTCATGGTCCAAGGGGAATCCCCATTTTAGGACATCTTCATTTGTTAGG
AAAAAAACCACACCATGATTTACAAAACCTAGCAAAGAAATATGGTCCATTTTTCTATAT
TAGACTAGGACTAATACCTACATATATTGCATCGTCTGTCGATACAGCCGAAAAATTCCT
CAAAACTTATGATCATATCTTTGCTACGAGGCCTCATAACGAGGCAGCTAAGTATTTGTC
ATATGGTCATAAGAATTTGGTATTTGCAAGGTATGGACCATATTGGCGCAACATGCGCAA
ATTGGTCACTCTAGACCTTTTAACTCATCAAAAGATCAATTCATTTCAATCCGTGAGAAC
ACAACAAGTTGATCTTATGATCAACTCGCTTAAAAATGATGGTGGTTGTGTTGTTGATCT
TAGTGCAAAAGTTGCAAAGTTGAGTGCTGACATAACTTGTTCGATGATATTTGGAAAGAA
GTACATGGATGAAGATTTGGACAAGAGGGGATTCAAAGGTATACTTCAAGAAGCTGTGCA
TTTAGCTGCAACACCAAATCTTGGAGATTTTTTCCCCTTCCTTGGTGTAATTGATCTCCA
AGGAATCACGCGCAAACTCAAGGAACTTTCAAAGGTGTTTGATGGATTTCTTGAGAAGAT
AATCGATGAACATGAACAGTCTCGTGACCAAAAGCAATCCAAAGACTTAGTGGACACGAT
GTTGGACATTATGCATTCAGGAGAGACAGAGTTTCAGTTTGATCGTACCAATATAAAAGC
TATTCTCATCGACATGCTTGTTGCAGCAATCGATACTTCAGCAACATCGGTAGTTTGGAC
AGTAACAGAGCTTCTTCGACATCCTCATGTGATGAAAAAACTCCAAAAGGAGTTGGAAGA
AGTTGTAGGACTTGAAAGAATGGTAAAAGAGTCAGACTTGGAGAAGTTGAACTACTTAGA
TATGGTTGTGAAAGAGGGTATGAGGCTGCATTCCGTTGTACCAGTAACGCAACGTGAGGC
CATGGAAGATTGTGTCGTTGATGGCTACCATATACGAAAGGGATCACGAATCATGATAAA
TCATTATGCAATTCAGAGGGATCCAAATGTTTGGCCCGAGCCTGAGAAGTTTTTACCAGA
GAGATTTGTTGGAAGTAGTATAGATATTCGAGGACGGGATTTTGAACTTTTACCATTTAG
CTCTGGTAGAAGAAGTTGCCCTGCAATCCCGCTGGGGATCACCGTTGTCCGCCTTATGTT
GGCACAATTGGTGCATTGCTTTGATTTGGAGCTTCCAAAGGGTATGCAACCTTGTGATTT
GGACGTTGATGAGCACTTTGGGATAGTAACATGCAAAGAAAACCATTTAATGGTTGTTCC
TAAATATCGACTAAACCAATGATGAAAATCATTTTCGATATTGTAAACCTTATCTTACTT
CATTAGCATTGGTGTGCGGTAACGTTTAGACCCTCTTGTTTGTACTTCTCTCTTCAGAGA
ATTGTTATTACTAATAAAGAAAGTTGTTAGACACAAGGTCTAGTAATTA
