Microarray Probes on PGSC0003DMT400036398
| Probe ID | Chip | Probe Sequence |
|---|
| CUST_48577_PI426222305 |
JHI_St_60k_v1 |
GCACTTTGGGATAGTAACATGCAAAGAAAACCATTTAATGGTTGTTCCTAAATATCGACT |
Link to Spud DB Genome Browser for Transcript PGSC0003DMT400036398
Click here to view details at Spud DB Genome Browser (opens in new window)
Source Transcript PGSC0003DMT400036398 - Homology to Model Species (BLASTX to E-value < 1e-50)
| Database | Link to BLAST Hit | Frame | E-value | Score | % Identity | Description |
|---|
| Tomato (ITAG) | None | - | - | - | - | - |
| TAIR PP10 |
AT4G36220.1 |
+1 |
6e-79 |
253 |
141/361 (39%) |
ferulic acid 5-hydroxylase 1 | chr4:17137584-17139619 REVERSE LENGTH=520 |
Transcript Sequence (1026 bp)
>PGSC0003DMT400036398 1026 pgsc_dm_v3.4
ATGATCAACTCGCTTAAAAATGATGGTGGTTGTGTTGTTGATCTTAGTGCAAAAGTTGCA
AAGTTGAGTGCTGACATAACTTGTTCGATGATATTTGGAAAGAAGTACATGGATGAAGAT
TTGGACAAGAGGGGATTCAAAGGTATACTTCAAGAAGCTGTGCATTTAGCTGCAACACCA
AATCTTGGAGATTTTTTCCCCTTCCTTGGTGTAATTGATCTCCAAGGAATCACGCGCAAA
CTCAAGGAACTTTCAAAGGTGTTTGATGGATTTCTTGAGAAGATAATCGATGAACATGAA
CAGTCTCGTGACCAAAAGCAATCCAAAGACTTAGTGGACACGATGTTGGACATTATGCAT
TCAGGAGAGACAGAGTTTCAGTTTGATCGTACCAATATAAAAGCTATTCTCATCGACATG
CTTGTTGCAGCAATCGATACTTCAGCAACATCGGTAGTTTGGACAGTAACAGAGCTTCTT
CGACATCCTCATGTGATGAAAAAACTCCAAAAGGAGTTGGAAGAAGTTGTAGGACTTGAA
AGAATGGTAAAAGAGTCAGACTTGGAGAAGTTGAACTACTTAGATATGGTTGTGAAAGAG
GGTATGAGGCTGCATTCCGTTGTACCAGTAACGCAACGTGAGGCCATGGAAGATTGTGTC
GTTGATGGCTACCATATACGAAAGGGATCACGAATCATGATAAATCATTATGCAATTCAG
AGGGATCCAAATGTTTGGCCCGAGCCTGAGAAGTTTTTACCAGAGAGATTTGTTGGAAGT
AGTATAGATATTCGAGGACGGGATTTTGAACTTTTACCATTTAGCTCTGGTAGAAGAAGT
TGCCCTGCAATCCCGCTGGGGATCACCGTTGTCCGCCTTATGTTGGCACAATTGGTGCAT
TGCTTTGATTTGGAGCTTCCAAAGGGTATGCAACCTTGTGATTTGGACGTTGATGAGCAC
TTTGGGATAGTAACATGCAAAGAAAACCATTTAATGGTTGTTCCTAAATATCGACTAAAC
CAATGA
